Gene : Gorai.011G240200 G. raimondii v2.1
Defline:  (1 of 3) 4.2.3.5 - Chorismate synthase / 5-enolpyruvylshikimate-3-phosphate phospholyase Genomic Order:  2402
Name:  ? Gorai.011G240200 Secondary Identifier:  ? PAC:26812167
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Graimondii ARO-PWY Gossypium raimondii pathologic  
Graimondii PWY-6163 Gossypium raimondii pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Gorai.011G240200 0.5kb upstream 0.5kb upstream 6599 true Chr11: 56529614-56536212 Gossypium raimondii
Gorai.011G240200 0.5kb upstream 0.5kb upstream 500 false Chr11: 56535713-56536212 Gossypium raimondii
Gorai.011G240200 0.5kb downstream 0.5kb downstream 6599 true Chr11: 56529114-56535712 Gossypium raimondii
Gorai.011G240200 0.5kb downstream 0.5kb downstream 500 false Chr11: 56529114-56529613 Gossypium raimondii
Gorai.011G240200 1.0kb upstream 1.0kb upstream 7099 true Chr11: 56529614-56536712 Gossypium raimondii
Gorai.011G240200 1.0kb upstream 1.0kb upstream 1000 false Chr11: 56535713-56536712 Gossypium raimondii
Gorai.011G240200 1.0kb downstream 1.0kb downstream 7099 true Chr11: 56528614-56535712 Gossypium raimondii
Gorai.011G240200 1.0kb downstream 1.0kb downstream 1000 false Chr11: 56528614-56529613 Gossypium raimondii
Gorai.011G240200 2.0kb upstream 2.0kb upstream 8099 true Chr11: 56529614-56537712 Gossypium raimondii
Gorai.011G240200 2.0kb upstream 2.0kb upstream 2000 false Chr11: 56535713-56537712 Gossypium raimondii
Gorai.011G240200 2.0kb downstream 2.0kb downstream 8099 true Chr11: 56527614-56535712 Gossypium raimondii
Gorai.011G240200 2.0kb downstream 2.0kb downstream 2000 false Chr11: 56527614-56529613 Gossypium raimondii
Gorai.011G240200 5.0kb upstream 5.0kb upstream 11099 true Chr11: 56529614-56540712 Gossypium raimondii
Gorai.011G240200 5.0kb upstream 5.0kb upstream 5000 false Chr11: 56535713-56540712 Gossypium raimondii
Gorai.011G240200 5.0kb downstream 5.0kb downstream 11099 true Chr11: 56524614-56535712 Gossypium raimondii
Gorai.011G240200 5.0kb downstream 5.0kb downstream 5000 false Chr11: 56524614-56529613 Gossypium raimondii
Gorai.011G240200 10.0kb upstream 10.0kb upstream 16099 true Chr11: 56529614-56545712 Gossypium raimondii
Gorai.011G240200 10.0kb upstream 10.0kb upstream 10000 false Chr11: 56535713-56545712 Gossypium raimondii
Gorai.011G240200 10.0kb downstream 10.0kb downstream 16099 true Chr11: 56519614-56535712 Gossypium raimondii
Gorai.011G240200 10.0kb downstream 10.0kb downstream 10000 false Chr11: 56519614-56529613 Gossypium raimondii

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041230 5273 Angiosperm View MSA
123812971 5264 Brassicales-Malvales Singleton cluster - no MSA
124309532 5266 SBM Singleton cluster - no MSA
124159143 5268 Malvidae Singleton cluster - no MSA
124052499 5270 Rosid View MSA
123620589 5271 Pentapetalae View MSA
122654985 5272 Eudicot View MSA
121346403 5274 Embryophyte View MSA
123428194 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain