Gene : Gorai.011G026700 G. raimondii v2.1
Defline:  (1 of 1) KOG3471 - RNA polymerase II transcription initiation/nucleotide excision repair factor TFIIH, subunit TFB2 Genomic Order:  267
Name:  ? Gorai.011G026700 Secondary Identifier:  ? PAC:26812202
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Gorai.011G026700 0.5kb upstream 0.5kb upstream 5081 true Chr11: 1969573-1974653 Gossypium raimondii
Gorai.011G026700 0.5kb upstream 0.5kb upstream 500 false Chr11: 1974154-1974653 Gossypium raimondii
Gorai.011G026700 0.5kb downstream 0.5kb downstream 5081 true Chr11: 1969073-1974153 Gossypium raimondii
Gorai.011G026700 0.5kb downstream 0.5kb downstream 500 false Chr11: 1969073-1969572 Gossypium raimondii
Gorai.011G026700 1.0kb upstream 1.0kb upstream 5581 true Chr11: 1969573-1975153 Gossypium raimondii
Gorai.011G026700 1.0kb upstream 1.0kb upstream 1000 false Chr11: 1974154-1975153 Gossypium raimondii
Gorai.011G026700 1.0kb downstream 1.0kb downstream 5581 true Chr11: 1968573-1974153 Gossypium raimondii
Gorai.011G026700 1.0kb downstream 1.0kb downstream 1000 false Chr11: 1968573-1969572 Gossypium raimondii
Gorai.011G026700 2.0kb upstream 2.0kb upstream 6581 true Chr11: 1969573-1976153 Gossypium raimondii
Gorai.011G026700 2.0kb upstream 2.0kb upstream 2000 false Chr11: 1974154-1976153 Gossypium raimondii
Gorai.011G026700 2.0kb downstream 2.0kb downstream 6581 true Chr11: 1967573-1974153 Gossypium raimondii
Gorai.011G026700 2.0kb downstream 2.0kb downstream 2000 false Chr11: 1967573-1969572 Gossypium raimondii
Gorai.011G026700 5.0kb upstream 5.0kb upstream 9581 true Chr11: 1969573-1979153 Gossypium raimondii
Gorai.011G026700 5.0kb upstream 5.0kb upstream 5000 false Chr11: 1974154-1979153 Gossypium raimondii
Gorai.011G026700 5.0kb downstream 5.0kb downstream 9581 true Chr11: 1964573-1974153 Gossypium raimondii
Gorai.011G026700 5.0kb downstream 5.0kb downstream 5000 false Chr11: 1964573-1969572 Gossypium raimondii
Gorai.011G026700 10.0kb upstream 10.0kb upstream 14581 true Chr11: 1969573-1984153 Gossypium raimondii
Gorai.011G026700 10.0kb upstream 10.0kb upstream 10000 false Chr11: 1974154-1984153 Gossypium raimondii
Gorai.011G026700 10.0kb downstream 10.0kb downstream 14581 true Chr11: 1959573-1974153 Gossypium raimondii
Gorai.011G026700 10.0kb downstream 10.0kb downstream 10000 false Chr11: 1959573-1969572 Gossypium raimondii

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123832858 5264 Brassicales-Malvales View MSA
124321828 5266 SBM View MSA
124238934 5268 Malvidae View MSA
124050287 5270 Rosid View MSA
123747685 5271 Pentapetalae View MSA
122797891 5272 Eudicot View MSA
122042198 5273 Angiosperm View MSA
121346770 5274 Embryophyte View MSA
123427579 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain