Gene : Gorai.011G105100 G. raimondii v2.1
Defline:  (1 of 6) 1.1.1.102 - 3-dehydrosphinganine reductase / KTS reductase Genomic Order:  1051
Name:  ? Gorai.011G105100 Secondary Identifier:  ? PAC:26807012
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Graimondii PWY-5129 Gossypium raimondii pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Gorai.011G105100 0.5kb upstream 0.5kb upstream 2399 true Chr11: 12158961-12161359 Gossypium raimondii
Gorai.011G105100 0.5kb upstream 0.5kb upstream 500 false Chr11: 12160860-12161359 Gossypium raimondii
Gorai.011G105100 0.5kb downstream 0.5kb downstream 2399 true Chr11: 12158461-12160859 Gossypium raimondii
Gorai.011G105100 0.5kb downstream 0.5kb downstream 500 false Chr11: 12158461-12158960 Gossypium raimondii
Gorai.011G105100 1.0kb upstream 1.0kb upstream 2899 true Chr11: 12158961-12161859 Gossypium raimondii
Gorai.011G105100 1.0kb upstream 1.0kb upstream 1000 false Chr11: 12160860-12161859 Gossypium raimondii
Gorai.011G105100 1.0kb downstream 1.0kb downstream 2899 true Chr11: 12157961-12160859 Gossypium raimondii
Gorai.011G105100 1.0kb downstream 1.0kb downstream 1000 false Chr11: 12157961-12158960 Gossypium raimondii
Gorai.011G105100 2.0kb upstream 2.0kb upstream 3899 true Chr11: 12158961-12162859 Gossypium raimondii
Gorai.011G105100 2.0kb upstream 2.0kb upstream 2000 false Chr11: 12160860-12162859 Gossypium raimondii
Gorai.011G105100 2.0kb downstream 2.0kb downstream 3899 true Chr11: 12156961-12160859 Gossypium raimondii
Gorai.011G105100 2.0kb downstream 2.0kb downstream 2000 false Chr11: 12156961-12158960 Gossypium raimondii
Gorai.011G105100 5.0kb upstream 5.0kb upstream 6899 true Chr11: 12158961-12165859 Gossypium raimondii
Gorai.011G105100 5.0kb upstream 5.0kb upstream 5000 false Chr11: 12160860-12165859 Gossypium raimondii
Gorai.011G105100 5.0kb downstream 5.0kb downstream 6899 true Chr11: 12153961-12160859 Gossypium raimondii
Gorai.011G105100 5.0kb downstream 5.0kb downstream 5000 false Chr11: 12153961-12158960 Gossypium raimondii
Gorai.011G105100 10.0kb upstream 10.0kb upstream 11899 true Chr11: 12158961-12170859 Gossypium raimondii
Gorai.011G105100 10.0kb upstream 10.0kb upstream 10000 false Chr11: 12160860-12170859 Gossypium raimondii
Gorai.011G105100 10.0kb downstream 10.0kb downstream 11899 true Chr11: 12148961-12160859 Gossypium raimondii
Gorai.011G105100 10.0kb downstream 10.0kb downstream 10000 false Chr11: 12148961-12158960 Gossypium raimondii

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123812268 5264 Brassicales-Malvales Singleton cluster - no MSA
124308859 5266 SBM Singleton cluster - no MSA
124158580 5268 Malvidae Singleton cluster - no MSA
123882922 5270 Rosid Singleton cluster - no MSA
123465749 5271 Pentapetalae Singleton cluster - no MSA
122501062 5272 Eudicot Singleton cluster - no MSA
122042834 5273 Angiosperm View MSA
121346352 5274 Embryophyte View MSA
123423987 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain