Gene : Gorai.011G290000 G. raimondii v2.1
Defline:  (1 of 6) PTHR11709:SF22 - LACCASE-12-RELATED Genomic Order:  2900
Name:  ? Gorai.011G290000 Secondary Identifier:  ? PAC:26809591
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Graimondii PWY-5466 Gossypium raimondii pathologic  
Graimondii PWY-6824 Gossypium raimondii pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Gorai.011G290000 0.5kb upstream 0.5kb upstream 3121 true Chr11: 62137542-62140662 Gossypium raimondii
Gorai.011G290000 0.5kb upstream 0.5kb upstream 500 false Chr11: 62137542-62138041 Gossypium raimondii
Gorai.011G290000 0.5kb downstream 0.5kb downstream 3121 true Chr11: 62138042-62141162 Gossypium raimondii
Gorai.011G290000 0.5kb downstream 0.5kb downstream 500 false Chr11: 62140663-62141162 Gossypium raimondii
Gorai.011G290000 1.0kb upstream 1.0kb upstream 3621 true Chr11: 62137042-62140662 Gossypium raimondii
Gorai.011G290000 1.0kb upstream 1.0kb upstream 1000 false Chr11: 62137042-62138041 Gossypium raimondii
Gorai.011G290000 1.0kb downstream 1.0kb downstream 3621 true Chr11: 62138042-62141662 Gossypium raimondii
Gorai.011G290000 1.0kb downstream 1.0kb downstream 1000 false Chr11: 62140663-62141662 Gossypium raimondii
Gorai.011G290000 2.0kb upstream 2.0kb upstream 4621 true Chr11: 62136042-62140662 Gossypium raimondii
Gorai.011G290000 2.0kb upstream 2.0kb upstream 2000 false Chr11: 62136042-62138041 Gossypium raimondii
Gorai.011G290000 2.0kb downstream 2.0kb downstream 4621 true Chr11: 62138042-62142662 Gossypium raimondii
Gorai.011G290000 2.0kb downstream 2.0kb downstream 2000 false Chr11: 62140663-62142662 Gossypium raimondii
Gorai.011G290000 5.0kb upstream 5.0kb upstream 7621 true Chr11: 62133042-62140662 Gossypium raimondii
Gorai.011G290000 5.0kb upstream 5.0kb upstream 5000 false Chr11: 62133042-62138041 Gossypium raimondii
Gorai.011G290000 5.0kb downstream 5.0kb downstream 7621 true Chr11: 62138042-62145662 Gossypium raimondii
Gorai.011G290000 5.0kb downstream 5.0kb downstream 5000 false Chr11: 62140663-62145662 Gossypium raimondii
Gorai.011G290000 10.0kb upstream 10.0kb upstream 12621 true Chr11: 62128042-62140662 Gossypium raimondii
Gorai.011G290000 10.0kb upstream 10.0kb upstream 10000 false Chr11: 62128042-62138041 Gossypium raimondii
Gorai.011G290000 10.0kb downstream 10.0kb downstream 12621 true Chr11: 62138042-62150662 Gossypium raimondii
Gorai.011G290000 10.0kb downstream 10.0kb downstream 10000 false Chr11: 62140663-62150662 Gossypium raimondii

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123812617 5264 Brassicales-Malvales Singleton cluster - no MSA
124309196 5266 SBM Singleton cluster - no MSA
124253319 5268 Malvidae View MSA
124063263 5270 Rosid View MSA
123746086 5271 Pentapetalae View MSA
122788360 5272 Eudicot View MSA
122044394 5273 Angiosperm View MSA
121350155 5274 Embryophyte View MSA
123428014 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain