Protein Domain : IPR006676

Type:  Family Name:  tRNA-splicing endonuclease
Description:  tRNA-splicing endonucleases () catalyse the endonucleolytic cleavage of pre tRNA at the 5' and 3' splice sites to release the intron and produces two half tRNA molecules bearing 5' hydroxyl and 2', 3'-cyclic phosphate termini [, ]. The genes encoding these proteins are homologous in eukaryotes and archea. The eukaryotic tRNA-splicing endonucleases are heterotetrameric while the archaeal endonucleases can be split into homodimeric and homotetrameric subgroups. Short Name:  tRNA_splic
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4 Child Features

DB identifier Type Name
IPR016589 Family tRNA-splicing endonuclease, SEN2 subunit
IPR016442 Family tRNA-splicing endonuclease, archaeal short subfamily
IPR016690 Family tRNA-splicing endonuclease, SEN34 subunit
IPR023516 Family tRNA-splicing endonuclease, archaeal long subfamily

0 Contains

2 Cross Referencess

Identifier
PTHR21227:SF0
TIGR00324

0 Found In

2 GO Annotations

GO Term Gene Name
GO:0000213 IPR006676
GO:0006388 IPR006676

2 Ontology Annotations

GO Term Gene Name
GO:0000213 IPR006676
GO:0006388 IPR006676

0 Parent Features

603 Proteins

DB identifier UniProt Accession Secondary Identifier Organism Name Length
evm.model.supercontig_318.5 PAC:16417308 Carica papaya 243  
orange1.1g043831m PAC:18097257 Citrus sinensis 243  
AT5G60230.1 Q9LSS3 PAC:19666988 Arabidopsis thaliana 250  
AT3G45577.1 Q2V3Q6 PAC:19660227 Arabidopsis thaliana 118  
AT3G45590.2 Q9M1E8 PAC:19659636 Arabidopsis thaliana 237  
AT3G45590.1 Q9M1E8 PAC:19659635 Arabidopsis thaliana 237  
Thhalv10015366m V4KWE1 PAC:20203065 Eutrema salsugineum 255  
Lus10019074 PAC:23152708 Linum usitatissimum 129  
Lus10036866 PAC:23171197 Linum usitatissimum 271  
Potri.009G131500.1 B9HR90 PAC:26986298 Populus trichocarpa 235  
Potri.014G083400.2 A0A2K1XSD4 PAC:27032114 Populus trichocarpa 122  
Potri.014G083400.1 A0A2K1XSD4 PAC:27032113 Populus trichocarpa 122  
Gorai.013G002800.2 A0A0D2TSQ7 PAC:26790358 Gossypium raimondii 245  
Gorai.013G002800.1 A0A0D2TSQ7 PAC:26790357 Gossypium raimondii 245  
Gorai.013G255400.1 A0A0D2SK56 PAC:26789300 Gossypium raimondii 230  
70667 C1MGU3 PAC:27345322 Micromonas pusilla CCMP1545 311  
51324 C1FDF2 PAC:27399010 Micromonas sp RCC299 321  
26883 A4S5U3 PAC:27416964 Ostreococcus lucimarinus 382  
Migut.D02178.1.p PAC:28929480 Mimulus guttatus 250  
Migut.I00230.2.p A0A022RA43 PAC:28931458 Mimulus guttatus 250  
Migut.I00230.4.p PAC:28931459 Mimulus guttatus 248  
Migut.I00230.5.p PAC:28931460 Mimulus guttatus 248  
Migut.I00230.3.p A0A022RA43 PAC:28931457 Mimulus guttatus 250  
Migut.I00232.1.p PAC:28930938 Mimulus guttatus 211  
Migut.I00236.1.p PAC:28931038 Mimulus guttatus 200  
Migut.I00245.1.p A0A022R5B4 PAC:28930250 Mimulus guttatus 163  
Araha.8175s0004.2.p PAC:28860850 Arabidopsis halleri 243  
Araha.8175s0004.3.p PAC:28860851 Arabidopsis halleri 243  
Araha.8175s0004.4.p PAC:28860848 Arabidopsis halleri 246  
Araha.8175s0004.1.p PAC:28860849 Arabidopsis halleri 246  

2 Publications

First Author Title Year Journal Volume Pages PubMed ID
            9321408
            9200603