Gene : Kaladp0060s0308 K. fedtschenkoi v1.1
Defline:  (1 of 1) K06443 - lycopene beta-cyclase (lcyB, crtL1, crtY) Genomic Order:  308
Name:  ? Kaladp0060s0308 Secondary Identifier:  ? PAC:35778877
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Kfedtschenkoi CAROTENOID-PWY Kalanchoe fedtschenkoi pathologic  
Kfedtschenkoi PWY-5943 Kalanchoe fedtschenkoi pathologic  
Kfedtschenkoi PWY-5947 Kalanchoe fedtschenkoi pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Kaladp0060s0308 0.5kb upstream 0.5kb upstream 2881 true Scaffold_60: 2653615-2656495 Kalanchoe fedtschenkoi
Kaladp0060s0308 0.5kb upstream 0.5kb upstream 500 false Scaffold_60: 2653615-2654114 Kalanchoe fedtschenkoi
Kaladp0060s0308 0.5kb downstream 0.5kb downstream 2881 true Scaffold_60: 2654115-2656995 Kalanchoe fedtschenkoi
Kaladp0060s0308 0.5kb downstream 0.5kb downstream 500 false Scaffold_60: 2656496-2656995 Kalanchoe fedtschenkoi
Kaladp0060s0308 1.0kb upstream 1.0kb upstream 3381 true Scaffold_60: 2653115-2656495 Kalanchoe fedtschenkoi
Kaladp0060s0308 1.0kb upstream 1.0kb upstream 1000 false Scaffold_60: 2653115-2654114 Kalanchoe fedtschenkoi
Kaladp0060s0308 1.0kb downstream 1.0kb downstream 3381 true Scaffold_60: 2654115-2657495 Kalanchoe fedtschenkoi
Kaladp0060s0308 1.0kb downstream 1.0kb downstream 1000 false Scaffold_60: 2656496-2657495 Kalanchoe fedtschenkoi
Kaladp0060s0308 2.0kb upstream 2.0kb upstream 4381 true Scaffold_60: 2652115-2656495 Kalanchoe fedtschenkoi
Kaladp0060s0308 2.0kb upstream 2.0kb upstream 2000 false Scaffold_60: 2652115-2654114 Kalanchoe fedtschenkoi
Kaladp0060s0308 2.0kb downstream 2.0kb downstream 4381 true Scaffold_60: 2654115-2658495 Kalanchoe fedtschenkoi
Kaladp0060s0308 2.0kb downstream 2.0kb downstream 2000 false Scaffold_60: 2656496-2658495 Kalanchoe fedtschenkoi
Kaladp0060s0308 5.0kb upstream 5.0kb upstream 7381 true Scaffold_60: 2649115-2656495 Kalanchoe fedtschenkoi
Kaladp0060s0308 5.0kb upstream 5.0kb upstream 5000 false Scaffold_60: 2649115-2654114 Kalanchoe fedtschenkoi
Kaladp0060s0308 5.0kb downstream 5.0kb downstream 7381 true Scaffold_60: 2654115-2661495 Kalanchoe fedtschenkoi
Kaladp0060s0308 5.0kb downstream 5.0kb downstream 5000 false Scaffold_60: 2656496-2661495 Kalanchoe fedtschenkoi
Kaladp0060s0308 10.0kb upstream 10.0kb upstream 12381 true Scaffold_60: 2644115-2656495 Kalanchoe fedtschenkoi
Kaladp0060s0308 10.0kb upstream 10.0kb upstream 10000 false Scaffold_60: 2644115-2654114 Kalanchoe fedtschenkoi
Kaladp0060s0308 10.0kb downstream 10.0kb downstream 12381 true Scaffold_60: 2654115-2666495 Kalanchoe fedtschenkoi
Kaladp0060s0308 10.0kb downstream 10.0kb downstream 10000 false Scaffold_60: 2656496-2666495 Kalanchoe fedtschenkoi

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123737595 5271 Pentapetalae View MSA
122786885 5272 Eudicot View MSA
122046204 5273 Angiosperm View MSA
121345644 5274 Embryophyte View MSA
123423874 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain