Gene : Kaladp0042s0336 K. fedtschenkoi v1.1
Defline:  (1 of 1) PTHR11946:SF53 - TYROSINE-TRNA LIGASE Genomic Order:  336
Name:  ? Kaladp0042s0336 Secondary Identifier:  ? PAC:35753283
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Kfedtschenkoi TRNA-CHARGING-PWY Kalanchoe fedtschenkoi pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Kaladp0042s0336 0.5kb upstream 0.5kb upstream 5792 true Scaffold_42: 3037178-3042969 Kalanchoe fedtschenkoi
Kaladp0042s0336 0.5kb upstream 0.5kb upstream 500 false Scaffold_42: 3042470-3042969 Kalanchoe fedtschenkoi
Kaladp0042s0336 0.5kb downstream 0.5kb downstream 5792 true Scaffold_42: 3036678-3042469 Kalanchoe fedtschenkoi
Kaladp0042s0336 0.5kb downstream 0.5kb downstream 500 false Scaffold_42: 3036678-3037177 Kalanchoe fedtschenkoi
Kaladp0042s0336 1.0kb upstream 1.0kb upstream 6292 true Scaffold_42: 3037178-3043469 Kalanchoe fedtschenkoi
Kaladp0042s0336 1.0kb upstream 1.0kb upstream 1000 false Scaffold_42: 3042470-3043469 Kalanchoe fedtschenkoi
Kaladp0042s0336 1.0kb downstream 1.0kb downstream 6292 true Scaffold_42: 3036178-3042469 Kalanchoe fedtschenkoi
Kaladp0042s0336 1.0kb downstream 1.0kb downstream 1000 false Scaffold_42: 3036178-3037177 Kalanchoe fedtschenkoi
Kaladp0042s0336 2.0kb upstream 2.0kb upstream 7292 true Scaffold_42: 3037178-3044469 Kalanchoe fedtschenkoi
Kaladp0042s0336 2.0kb upstream 2.0kb upstream 2000 false Scaffold_42: 3042470-3044469 Kalanchoe fedtschenkoi
Kaladp0042s0336 2.0kb downstream 2.0kb downstream 7292 true Scaffold_42: 3035178-3042469 Kalanchoe fedtschenkoi
Kaladp0042s0336 2.0kb downstream 2.0kb downstream 2000 false Scaffold_42: 3035178-3037177 Kalanchoe fedtschenkoi
Kaladp0042s0336 5.0kb upstream 5.0kb upstream 10292 true Scaffold_42: 3037178-3047469 Kalanchoe fedtschenkoi
Kaladp0042s0336 5.0kb upstream 5.0kb upstream 5000 false Scaffold_42: 3042470-3047469 Kalanchoe fedtschenkoi
Kaladp0042s0336 5.0kb downstream 5.0kb downstream 10292 true Scaffold_42: 3032178-3042469 Kalanchoe fedtschenkoi
Kaladp0042s0336 5.0kb downstream 5.0kb downstream 5000 false Scaffold_42: 3032178-3037177 Kalanchoe fedtschenkoi
Kaladp0042s0336 10.0kb upstream 10.0kb upstream 15292 true Scaffold_42: 3037178-3052469 Kalanchoe fedtschenkoi
Kaladp0042s0336 10.0kb upstream 10.0kb upstream 10000 false Scaffold_42: 3042470-3052469 Kalanchoe fedtschenkoi
Kaladp0042s0336 10.0kb downstream 10.0kb downstream 15292 true Scaffold_42: 3027178-3042469 Kalanchoe fedtschenkoi
Kaladp0042s0336 10.0kb downstream 10.0kb downstream 10000 false Scaffold_42: 3027178-3037177 Kalanchoe fedtschenkoi

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041140 5273 Angiosperm View MSA
123747436 5271 Pentapetalae View MSA
122790144 5272 Eudicot View MSA
121344192 5274 Embryophyte View MSA
123424631 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain