Gene : Genemark1.1549_g C. subellipsoidea C-169 v2.0
Defline:  (1 of 3) 6.1.1.10 - Methionine--tRNA ligase / MetRS Genomic Order:  86
Name:  ? Genemark1.1549_g Secondary Identifier:  ? PAC:27390726
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
CsubellipsoideaC-169 TRNA-CHARGING-PWY Coccomyxa subellipsoidea C-169 pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Genemark1.1549_g 0.5kb upstream 0.5kb upstream 2116 true scaffold_3: 493104-495219 Coccomyxa subellipsoidea C-169
Genemark1.1549_g 0.5kb upstream 0.5kb upstream 500 false scaffold_3: 493104-493603 Coccomyxa subellipsoidea C-169
Genemark1.1549_g 0.5kb downstream 0.5kb downstream 2116 true scaffold_3: 493604-495719 Coccomyxa subellipsoidea C-169
Genemark1.1549_g 0.5kb downstream 0.5kb downstream 500 false scaffold_3: 495220-495719 Coccomyxa subellipsoidea C-169
Genemark1.1549_g 1.0kb upstream 1.0kb upstream 2616 true scaffold_3: 492604-495219 Coccomyxa subellipsoidea C-169
Genemark1.1549_g 1.0kb upstream 1.0kb upstream 1000 false scaffold_3: 492604-493603 Coccomyxa subellipsoidea C-169
Genemark1.1549_g 1.0kb downstream 1.0kb downstream 2616 true scaffold_3: 493604-496219 Coccomyxa subellipsoidea C-169
Genemark1.1549_g 1.0kb downstream 1.0kb downstream 1000 false scaffold_3: 495220-496219 Coccomyxa subellipsoidea C-169
Genemark1.1549_g 2.0kb upstream 2.0kb upstream 3616 true scaffold_3: 491604-495219 Coccomyxa subellipsoidea C-169
Genemark1.1549_g 2.0kb upstream 2.0kb upstream 2000 false scaffold_3: 491604-493603 Coccomyxa subellipsoidea C-169
Genemark1.1549_g 2.0kb downstream 2.0kb downstream 3616 true scaffold_3: 493604-497219 Coccomyxa subellipsoidea C-169
Genemark1.1549_g 2.0kb downstream 2.0kb downstream 2000 false scaffold_3: 495220-497219 Coccomyxa subellipsoidea C-169
Genemark1.1549_g 5.0kb upstream 5.0kb upstream 6616 true scaffold_3: 488604-495219 Coccomyxa subellipsoidea C-169
Genemark1.1549_g 5.0kb upstream 5.0kb upstream 5000 false scaffold_3: 488604-493603 Coccomyxa subellipsoidea C-169
Genemark1.1549_g 5.0kb downstream 5.0kb downstream 6616 true scaffold_3: 493604-500219 Coccomyxa subellipsoidea C-169
Genemark1.1549_g 5.0kb downstream 5.0kb downstream 5000 false scaffold_3: 495220-500219 Coccomyxa subellipsoidea C-169
Genemark1.1549_g 10.0kb upstream 10.0kb upstream 11616 true scaffold_3: 483604-495219 Coccomyxa subellipsoidea C-169
Genemark1.1549_g 10.0kb upstream 10.0kb upstream 10000 false scaffold_3: 483604-493603 Coccomyxa subellipsoidea C-169
Genemark1.1549_g 10.0kb downstream 10.0kb downstream 11616 true scaffold_3: 493604-505219 Coccomyxa subellipsoidea C-169
Genemark1.1549_g 10.0kb downstream 10.0kb downstream 10000 false scaffold_3: 495220-505219 Coccomyxa subellipsoidea C-169

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124113587 5260 Chlorophyte View MSA
123427531 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier