Gene : estExt_Genemark1.C_60405 C. subellipsoidea C-169 v2.0
Defline:  (1 of 2) 2.2.1.6 - Acetolactate synthase / Alpha-acetolactate synthetase Genomic Order:  432
Name:  ? estExt_Genemark1.C_60405 Secondary Identifier:  ? PAC:27391253
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Sequence Feature Displayer

Ontology Annotation Displayer

4 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
CsubellipsoideaC-169 BRANCHED-CHAIN-AA-SYN-PWY Coccomyxa subellipsoidea C-169 pathologic  
CsubellipsoideaC-169 ILEUSYN-PWY Coccomyxa subellipsoidea C-169 pathologic  
CsubellipsoideaC-169 PWY-3001 Coccomyxa subellipsoidea C-169 pathologic  
CsubellipsoideaC-169 VALSYN-PWY Coccomyxa subellipsoidea C-169 pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
estExt_Genemark1.C_60405 0.5kb upstream 0.5kb upstream 6462 true scaffold_6: 2037990-2044451 Coccomyxa subellipsoidea C-169
estExt_Genemark1.C_60405 0.5kb upstream 0.5kb upstream 500 false scaffold_6: 2037990-2038489 Coccomyxa subellipsoidea C-169
estExt_Genemark1.C_60405 0.5kb downstream 0.5kb downstream 6462 true scaffold_6: 2038490-2044951 Coccomyxa subellipsoidea C-169
estExt_Genemark1.C_60405 0.5kb downstream 0.5kb downstream 500 false scaffold_6: 2044452-2044951 Coccomyxa subellipsoidea C-169
estExt_Genemark1.C_60405 1.0kb upstream 1.0kb upstream 6962 true scaffold_6: 2037490-2044451 Coccomyxa subellipsoidea C-169
estExt_Genemark1.C_60405 1.0kb upstream 1.0kb upstream 1000 false scaffold_6: 2037490-2038489 Coccomyxa subellipsoidea C-169
estExt_Genemark1.C_60405 1.0kb downstream 1.0kb downstream 6962 true scaffold_6: 2038490-2045451 Coccomyxa subellipsoidea C-169
estExt_Genemark1.C_60405 1.0kb downstream 1.0kb downstream 1000 false scaffold_6: 2044452-2045451 Coccomyxa subellipsoidea C-169
estExt_Genemark1.C_60405 2.0kb upstream 2.0kb upstream 7962 true scaffold_6: 2036490-2044451 Coccomyxa subellipsoidea C-169
estExt_Genemark1.C_60405 2.0kb upstream 2.0kb upstream 2000 false scaffold_6: 2036490-2038489 Coccomyxa subellipsoidea C-169
estExt_Genemark1.C_60405 2.0kb downstream 2.0kb downstream 7962 true scaffold_6: 2038490-2046451 Coccomyxa subellipsoidea C-169
estExt_Genemark1.C_60405 2.0kb downstream 2.0kb downstream 2000 false scaffold_6: 2044452-2046451 Coccomyxa subellipsoidea C-169
estExt_Genemark1.C_60405 5.0kb upstream 5.0kb upstream 10962 true scaffold_6: 2033490-2044451 Coccomyxa subellipsoidea C-169
estExt_Genemark1.C_60405 5.0kb upstream 5.0kb upstream 5000 false scaffold_6: 2033490-2038489 Coccomyxa subellipsoidea C-169
estExt_Genemark1.C_60405 5.0kb downstream 5.0kb downstream 10962 true scaffold_6: 2038490-2049451 Coccomyxa subellipsoidea C-169
estExt_Genemark1.C_60405 5.0kb downstream 5.0kb downstream 5000 false scaffold_6: 2044452-2049451 Coccomyxa subellipsoidea C-169
estExt_Genemark1.C_60405 10.0kb upstream 10.0kb upstream 15962 true scaffold_6: 2028490-2044451 Coccomyxa subellipsoidea C-169
estExt_Genemark1.C_60405 10.0kb upstream 10.0kb upstream 10000 false scaffold_6: 2028490-2038489 Coccomyxa subellipsoidea C-169
estExt_Genemark1.C_60405 10.0kb downstream 10.0kb downstream 15962 true scaffold_6: 2038490-2054451 Coccomyxa subellipsoidea C-169
estExt_Genemark1.C_60405 10.0kb downstream 10.0kb downstream 10000 false scaffold_6: 2044452-2054451 Coccomyxa subellipsoidea C-169

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124097045 5260 Chlorophyte Singleton cluster - no MSA
123428055 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier