Gene : fgenesh1_pm_6_num_60 C. subellipsoidea C-169 v2.0
Defline:  (1 of 2) 4.2.3.5 - Chorismate synthase / 5-enolpyruvylshikimate-3-phosphate phospholyase Genomic Order:  150
Name:  ? fgenesh1_pm_6_num_60 Secondary Identifier:  ? PAC:27390994
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
CsubellipsoideaC-169 ARO-PWY Coccomyxa subellipsoidea C-169 pathologic  
CsubellipsoideaC-169 PWY-6163 Coccomyxa subellipsoidea C-169 pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
fgenesh1_pm_6_num_60 0.5kb upstream 0.5kb upstream 3360 true scaffold_6: 776831-780190 Coccomyxa subellipsoidea C-169
fgenesh1_pm_6_num_60 0.5kb upstream 0.5kb upstream 500 false scaffold_6: 779691-780190 Coccomyxa subellipsoidea C-169
fgenesh1_pm_6_num_60 0.5kb downstream 0.5kb downstream 3360 true scaffold_6: 776331-779690 Coccomyxa subellipsoidea C-169
fgenesh1_pm_6_num_60 0.5kb downstream 0.5kb downstream 500 false scaffold_6: 776331-776830 Coccomyxa subellipsoidea C-169
fgenesh1_pm_6_num_60 1.0kb upstream 1.0kb upstream 3860 true scaffold_6: 776831-780690 Coccomyxa subellipsoidea C-169
fgenesh1_pm_6_num_60 1.0kb upstream 1.0kb upstream 1000 false scaffold_6: 779691-780690 Coccomyxa subellipsoidea C-169
fgenesh1_pm_6_num_60 1.0kb downstream 1.0kb downstream 3860 true scaffold_6: 775831-779690 Coccomyxa subellipsoidea C-169
fgenesh1_pm_6_num_60 1.0kb downstream 1.0kb downstream 1000 false scaffold_6: 775831-776830 Coccomyxa subellipsoidea C-169
fgenesh1_pm_6_num_60 2.0kb upstream 2.0kb upstream 4860 true scaffold_6: 776831-781690 Coccomyxa subellipsoidea C-169
fgenesh1_pm_6_num_60 2.0kb upstream 2.0kb upstream 2000 false scaffold_6: 779691-781690 Coccomyxa subellipsoidea C-169
fgenesh1_pm_6_num_60 2.0kb downstream 2.0kb downstream 4860 true scaffold_6: 774831-779690 Coccomyxa subellipsoidea C-169
fgenesh1_pm_6_num_60 2.0kb downstream 2.0kb downstream 2000 false scaffold_6: 774831-776830 Coccomyxa subellipsoidea C-169
fgenesh1_pm_6_num_60 5.0kb upstream 5.0kb upstream 7860 true scaffold_6: 776831-784690 Coccomyxa subellipsoidea C-169
fgenesh1_pm_6_num_60 5.0kb upstream 5.0kb upstream 5000 false scaffold_6: 779691-784690 Coccomyxa subellipsoidea C-169
fgenesh1_pm_6_num_60 5.0kb downstream 5.0kb downstream 7860 true scaffold_6: 771831-779690 Coccomyxa subellipsoidea C-169
fgenesh1_pm_6_num_60 5.0kb downstream 5.0kb downstream 5000 false scaffold_6: 771831-776830 Coccomyxa subellipsoidea C-169
fgenesh1_pm_6_num_60 10.0kb upstream 10.0kb upstream 12860 true scaffold_6: 776831-789690 Coccomyxa subellipsoidea C-169
fgenesh1_pm_6_num_60 10.0kb upstream 10.0kb upstream 10000 false scaffold_6: 779691-789690 Coccomyxa subellipsoidea C-169
fgenesh1_pm_6_num_60 10.0kb downstream 10.0kb downstream 12860 true scaffold_6: 766831-779690 Coccomyxa subellipsoidea C-169
fgenesh1_pm_6_num_60 10.0kb downstream 10.0kb downstream 10000 false scaffold_6: 766831-776830 Coccomyxa subellipsoidea C-169

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124110609 5260 Chlorophyte View MSA
123428194 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier