Gene : fgenesh1_pg_13_num_225 C. subellipsoidea C-169 v2.0
Defline:  (1 of 1) 1.3.3.4 - Protoporphyrinogen oxidase / Protoporphyrinogenase Genomic Order:  308
Name:  ? fgenesh1_pg_13_num_225 Secondary Identifier:  ? PAC:27386128
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
CsubellipsoideaC-169 CHLOROPHYLL-SYN Coccomyxa subellipsoidea C-169 pathologic  
CsubellipsoideaC-169 HEME-BIOSYNTHESIS-II Coccomyxa subellipsoidea C-169 pathologic  
CsubellipsoideaC-169 PWY-7159 Coccomyxa subellipsoidea C-169 pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
fgenesh1_pg_13_num_225 0.5kb upstream 0.5kb upstream 4678 true scaffold_13: 1688865-1693542 Coccomyxa subellipsoidea C-169
fgenesh1_pg_13_num_225 0.5kb upstream 0.5kb upstream 500 false scaffold_13: 1688865-1689364 Coccomyxa subellipsoidea C-169
fgenesh1_pg_13_num_225 0.5kb downstream 0.5kb downstream 4678 true scaffold_13: 1689365-1694042 Coccomyxa subellipsoidea C-169
fgenesh1_pg_13_num_225 0.5kb downstream 0.5kb downstream 500 false scaffold_13: 1693543-1694042 Coccomyxa subellipsoidea C-169
fgenesh1_pg_13_num_225 1.0kb upstream 1.0kb upstream 5178 true scaffold_13: 1688365-1693542 Coccomyxa subellipsoidea C-169
fgenesh1_pg_13_num_225 1.0kb upstream 1.0kb upstream 1000 false scaffold_13: 1688365-1689364 Coccomyxa subellipsoidea C-169
fgenesh1_pg_13_num_225 1.0kb downstream 1.0kb downstream 5178 true scaffold_13: 1689365-1694542 Coccomyxa subellipsoidea C-169
fgenesh1_pg_13_num_225 1.0kb downstream 1.0kb downstream 1000 false scaffold_13: 1693543-1694542 Coccomyxa subellipsoidea C-169
fgenesh1_pg_13_num_225 2.0kb upstream 2.0kb upstream 6178 true scaffold_13: 1687365-1693542 Coccomyxa subellipsoidea C-169
fgenesh1_pg_13_num_225 2.0kb upstream 2.0kb upstream 2000 false scaffold_13: 1687365-1689364 Coccomyxa subellipsoidea C-169
fgenesh1_pg_13_num_225 2.0kb downstream 2.0kb downstream 6178 true scaffold_13: 1689365-1695542 Coccomyxa subellipsoidea C-169
fgenesh1_pg_13_num_225 2.0kb downstream 2.0kb downstream 2000 false scaffold_13: 1693543-1695542 Coccomyxa subellipsoidea C-169
fgenesh1_pg_13_num_225 5.0kb upstream 5.0kb upstream 9178 true scaffold_13: 1684365-1693542 Coccomyxa subellipsoidea C-169
fgenesh1_pg_13_num_225 5.0kb upstream 5.0kb upstream 5000 false scaffold_13: 1684365-1689364 Coccomyxa subellipsoidea C-169
fgenesh1_pg_13_num_225 5.0kb downstream 5.0kb downstream 9178 true scaffold_13: 1689365-1698542 Coccomyxa subellipsoidea C-169
fgenesh1_pg_13_num_225 5.0kb downstream 5.0kb downstream 5000 false scaffold_13: 1693543-1698542 Coccomyxa subellipsoidea C-169
fgenesh1_pg_13_num_225 10.0kb upstream 10.0kb upstream 14178 true scaffold_13: 1679365-1693542 Coccomyxa subellipsoidea C-169
fgenesh1_pg_13_num_225 10.0kb upstream 10.0kb upstream 10000 false scaffold_13: 1679365-1689364 Coccomyxa subellipsoidea C-169
fgenesh1_pg_13_num_225 10.0kb downstream 10.0kb downstream 14178 true scaffold_13: 1689365-1703542 Coccomyxa subellipsoidea C-169
fgenesh1_pg_13_num_225 10.0kb downstream 10.0kb downstream 10000 false scaffold_13: 1693543-1703542 Coccomyxa subellipsoidea C-169

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124109276 5260 Chlorophyte View MSA
123424000 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier