Gene : estExt_Genewise1Plus.C_130056 C. subellipsoidea C-169 v2.0
Defline:  (1 of 2) 4.2.3.5 - Chorismate synthase / 5-enolpyruvylshikimate-3-phosphate phospholyase Genomic Order:  66
Name:  ? estExt_Genewise1Plus.C_130056 Secondary Identifier:  ? PAC:27386240
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
CsubellipsoideaC-169 ARO-PWY Coccomyxa subellipsoidea C-169 pathologic  
CsubellipsoideaC-169 PWY-6163 Coccomyxa subellipsoidea C-169 pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
estExt_Genewise1Plus.C_130056 0.5kb upstream 0.5kb upstream 5619 true scaffold_13: 369622-375240 Coccomyxa subellipsoidea C-169
estExt_Genewise1Plus.C_130056 0.5kb upstream 0.5kb upstream 500 false scaffold_13: 374741-375240 Coccomyxa subellipsoidea C-169
estExt_Genewise1Plus.C_130056 0.5kb downstream 0.5kb downstream 5619 true scaffold_13: 369122-374740 Coccomyxa subellipsoidea C-169
estExt_Genewise1Plus.C_130056 0.5kb downstream 0.5kb downstream 500 false scaffold_13: 369122-369621 Coccomyxa subellipsoidea C-169
estExt_Genewise1Plus.C_130056 1.0kb upstream 1.0kb upstream 6119 true scaffold_13: 369622-375740 Coccomyxa subellipsoidea C-169
estExt_Genewise1Plus.C_130056 1.0kb upstream 1.0kb upstream 1000 false scaffold_13: 374741-375740 Coccomyxa subellipsoidea C-169
estExt_Genewise1Plus.C_130056 1.0kb downstream 1.0kb downstream 6119 true scaffold_13: 368622-374740 Coccomyxa subellipsoidea C-169
estExt_Genewise1Plus.C_130056 1.0kb downstream 1.0kb downstream 1000 false scaffold_13: 368622-369621 Coccomyxa subellipsoidea C-169
estExt_Genewise1Plus.C_130056 2.0kb upstream 2.0kb upstream 7119 true scaffold_13: 369622-376740 Coccomyxa subellipsoidea C-169
estExt_Genewise1Plus.C_130056 2.0kb upstream 2.0kb upstream 2000 false scaffold_13: 374741-376740 Coccomyxa subellipsoidea C-169
estExt_Genewise1Plus.C_130056 2.0kb downstream 2.0kb downstream 7119 true scaffold_13: 367622-374740 Coccomyxa subellipsoidea C-169
estExt_Genewise1Plus.C_130056 2.0kb downstream 2.0kb downstream 2000 false scaffold_13: 367622-369621 Coccomyxa subellipsoidea C-169
estExt_Genewise1Plus.C_130056 5.0kb upstream 5.0kb upstream 10119 true scaffold_13: 369622-379740 Coccomyxa subellipsoidea C-169
estExt_Genewise1Plus.C_130056 5.0kb upstream 5.0kb upstream 5000 false scaffold_13: 374741-379740 Coccomyxa subellipsoidea C-169
estExt_Genewise1Plus.C_130056 5.0kb downstream 5.0kb downstream 10119 true scaffold_13: 364622-374740 Coccomyxa subellipsoidea C-169
estExt_Genewise1Plus.C_130056 5.0kb downstream 5.0kb downstream 5000 false scaffold_13: 364622-369621 Coccomyxa subellipsoidea C-169
estExt_Genewise1Plus.C_130056 10.0kb upstream 10.0kb upstream 15119 true scaffold_13: 369622-384740 Coccomyxa subellipsoidea C-169
estExt_Genewise1Plus.C_130056 10.0kb upstream 10.0kb upstream 10000 false scaffold_13: 374741-384740 Coccomyxa subellipsoidea C-169
estExt_Genewise1Plus.C_130056 10.0kb downstream 10.0kb downstream 15119 true scaffold_13: 359622-374740 Coccomyxa subellipsoidea C-169
estExt_Genewise1Plus.C_130056 10.0kb downstream 10.0kb downstream 10000 false scaffold_13: 359622-369621 Coccomyxa subellipsoidea C-169

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124110609 5260 Chlorophyte View MSA
123428194 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier