Gene : Genemark1.5705_g C. subellipsoidea C-169 v2.0
Defline:  (1 of 8) PF01391 - Collagen triple helix repeat (20 copies) (Collagen) Genomic Order:  159
Name:  ? Genemark1.5705_g Secondary Identifier:  ? PAC:27391614
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Genemark1.5705_g 0.5kb upstream 0.5kb upstream 21659 true scaffold_12: 834060-855718 Coccomyxa subellipsoidea C-169
Genemark1.5705_g 0.5kb upstream 0.5kb upstream 500 false scaffold_12: 834060-834559 Coccomyxa subellipsoidea C-169
Genemark1.5705_g 0.5kb downstream 0.5kb downstream 21659 true scaffold_12: 834560-856218 Coccomyxa subellipsoidea C-169
Genemark1.5705_g 0.5kb downstream 0.5kb downstream 500 false scaffold_12: 855719-856218 Coccomyxa subellipsoidea C-169
Genemark1.5705_g 1.0kb upstream 1.0kb upstream 22159 true scaffold_12: 833560-855718 Coccomyxa subellipsoidea C-169
Genemark1.5705_g 1.0kb upstream 1.0kb upstream 1000 false scaffold_12: 833560-834559 Coccomyxa subellipsoidea C-169
Genemark1.5705_g 1.0kb downstream 1.0kb downstream 22159 true scaffold_12: 834560-856718 Coccomyxa subellipsoidea C-169
Genemark1.5705_g 1.0kb downstream 1.0kb downstream 1000 false scaffold_12: 855719-856718 Coccomyxa subellipsoidea C-169
Genemark1.5705_g 2.0kb upstream 2.0kb upstream 23159 true scaffold_12: 832560-855718 Coccomyxa subellipsoidea C-169
Genemark1.5705_g 2.0kb upstream 2.0kb upstream 2000 false scaffold_12: 832560-834559 Coccomyxa subellipsoidea C-169
Genemark1.5705_g 2.0kb downstream 2.0kb downstream 23159 true scaffold_12: 834560-857718 Coccomyxa subellipsoidea C-169
Genemark1.5705_g 2.0kb downstream 2.0kb downstream 2000 false scaffold_12: 855719-857718 Coccomyxa subellipsoidea C-169
Genemark1.5705_g 5.0kb upstream 5.0kb upstream 26159 true scaffold_12: 829560-855718 Coccomyxa subellipsoidea C-169
Genemark1.5705_g 5.0kb upstream 5.0kb upstream 5000 false scaffold_12: 829560-834559 Coccomyxa subellipsoidea C-169
Genemark1.5705_g 5.0kb downstream 5.0kb downstream 26159 true scaffold_12: 834560-860718 Coccomyxa subellipsoidea C-169
Genemark1.5705_g 5.0kb downstream 5.0kb downstream 5000 false scaffold_12: 855719-860718 Coccomyxa subellipsoidea C-169
Genemark1.5705_g 10.0kb upstream 10.0kb upstream 31159 true scaffold_12: 824560-855718 Coccomyxa subellipsoidea C-169
Genemark1.5705_g 10.0kb upstream 10.0kb upstream 10000 false scaffold_12: 824560-834559 Coccomyxa subellipsoidea C-169
Genemark1.5705_g 10.0kb downstream 10.0kb downstream 31159 true scaffold_12: 834560-865718 Coccomyxa subellipsoidea C-169
Genemark1.5705_g 10.0kb downstream 10.0kb downstream 10000 false scaffold_12: 855719-865718 Coccomyxa subellipsoidea C-169

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124097788 5260 Chlorophyte View MSA
123413946 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier