Gene : fgenesh1_pm_15_num_66 C. subellipsoidea C-169 v2.0
Defline:  (1 of 1) PTHR11777:SF14 - ALANINE--TRNA LIGASE, CHLOROPLASTIC-RELATED Genomic Order:  170
Name:  ? fgenesh1_pm_15_num_66 Secondary Identifier:  ? PAC:27394870
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
CsubellipsoideaC-169 TRNA-CHARGING-PWY Coccomyxa subellipsoidea C-169 pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
fgenesh1_pm_15_num_66 0.5kb upstream 0.5kb upstream 7413 true scaffold_15: 888382-895794 Coccomyxa subellipsoidea C-169
fgenesh1_pm_15_num_66 0.5kb upstream 0.5kb upstream 500 false scaffold_15: 888382-888881 Coccomyxa subellipsoidea C-169
fgenesh1_pm_15_num_66 0.5kb downstream 0.5kb downstream 7413 true scaffold_15: 888882-896294 Coccomyxa subellipsoidea C-169
fgenesh1_pm_15_num_66 0.5kb downstream 0.5kb downstream 500 false scaffold_15: 895795-896294 Coccomyxa subellipsoidea C-169
fgenesh1_pm_15_num_66 1.0kb upstream 1.0kb upstream 7913 true scaffold_15: 887882-895794 Coccomyxa subellipsoidea C-169
fgenesh1_pm_15_num_66 1.0kb upstream 1.0kb upstream 1000 false scaffold_15: 887882-888881 Coccomyxa subellipsoidea C-169
fgenesh1_pm_15_num_66 1.0kb downstream 1.0kb downstream 7913 true scaffold_15: 888882-896794 Coccomyxa subellipsoidea C-169
fgenesh1_pm_15_num_66 1.0kb downstream 1.0kb downstream 1000 false scaffold_15: 895795-896794 Coccomyxa subellipsoidea C-169
fgenesh1_pm_15_num_66 2.0kb upstream 2.0kb upstream 8913 true scaffold_15: 886882-895794 Coccomyxa subellipsoidea C-169
fgenesh1_pm_15_num_66 2.0kb upstream 2.0kb upstream 2000 false scaffold_15: 886882-888881 Coccomyxa subellipsoidea C-169
fgenesh1_pm_15_num_66 2.0kb downstream 2.0kb downstream 8913 true scaffold_15: 888882-897794 Coccomyxa subellipsoidea C-169
fgenesh1_pm_15_num_66 2.0kb downstream 2.0kb downstream 2000 false scaffold_15: 895795-897794 Coccomyxa subellipsoidea C-169
fgenesh1_pm_15_num_66 5.0kb upstream 5.0kb upstream 11913 true scaffold_15: 883882-895794 Coccomyxa subellipsoidea C-169
fgenesh1_pm_15_num_66 5.0kb upstream 5.0kb upstream 5000 false scaffold_15: 883882-888881 Coccomyxa subellipsoidea C-169
fgenesh1_pm_15_num_66 5.0kb downstream 5.0kb downstream 11913 true scaffold_15: 888882-900794 Coccomyxa subellipsoidea C-169
fgenesh1_pm_15_num_66 5.0kb downstream 5.0kb downstream 5000 false scaffold_15: 895795-900794 Coccomyxa subellipsoidea C-169
fgenesh1_pm_15_num_66 10.0kb upstream 10.0kb upstream 16913 true scaffold_15: 878882-895794 Coccomyxa subellipsoidea C-169
fgenesh1_pm_15_num_66 10.0kb upstream 10.0kb upstream 10000 false scaffold_15: 878882-888881 Coccomyxa subellipsoidea C-169
fgenesh1_pm_15_num_66 10.0kb downstream 10.0kb downstream 16913 true scaffold_15: 888882-905794 Coccomyxa subellipsoidea C-169
fgenesh1_pm_15_num_66 10.0kb downstream 10.0kb downstream 10000 false scaffold_15: 895795-905794 Coccomyxa subellipsoidea C-169

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124108444 5260 Chlorophyte View MSA
123425032 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier