Gene : estExt_Genewise1Plus.C_170178 C. subellipsoidea C-169 v2.0
Defline:  (1 of 2) PF01716 - Manganese-stabilising protein / photosystem II polypeptide (MSP) Genomic Order:  213
Name:  ? estExt_Genewise1Plus.C_170178 Secondary Identifier:  ? PAC:27394562
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
estExt_Genewise1Plus.C_170178 0.5kb upstream 0.5kb upstream 2922 true scaffold_17: 1351981-1354902 Coccomyxa subellipsoidea C-169
estExt_Genewise1Plus.C_170178 0.5kb upstream 0.5kb upstream 500 false scaffold_17: 1354403-1354902 Coccomyxa subellipsoidea C-169
estExt_Genewise1Plus.C_170178 0.5kb downstream 0.5kb downstream 2922 true scaffold_17: 1351481-1354402 Coccomyxa subellipsoidea C-169
estExt_Genewise1Plus.C_170178 0.5kb downstream 0.5kb downstream 500 false scaffold_17: 1351481-1351980 Coccomyxa subellipsoidea C-169
estExt_Genewise1Plus.C_170178 1.0kb upstream 1.0kb upstream 3422 true scaffold_17: 1351981-1355402 Coccomyxa subellipsoidea C-169
estExt_Genewise1Plus.C_170178 1.0kb upstream 1.0kb upstream 1000 false scaffold_17: 1354403-1355402 Coccomyxa subellipsoidea C-169
estExt_Genewise1Plus.C_170178 1.0kb downstream 1.0kb downstream 3422 true scaffold_17: 1350981-1354402 Coccomyxa subellipsoidea C-169
estExt_Genewise1Plus.C_170178 1.0kb downstream 1.0kb downstream 1000 false scaffold_17: 1350981-1351980 Coccomyxa subellipsoidea C-169
estExt_Genewise1Plus.C_170178 2.0kb upstream 2.0kb upstream 4422 true scaffold_17: 1351981-1356402 Coccomyxa subellipsoidea C-169
estExt_Genewise1Plus.C_170178 2.0kb upstream 2.0kb upstream 2000 false scaffold_17: 1354403-1356402 Coccomyxa subellipsoidea C-169
estExt_Genewise1Plus.C_170178 2.0kb downstream 2.0kb downstream 4422 true scaffold_17: 1349981-1354402 Coccomyxa subellipsoidea C-169
estExt_Genewise1Plus.C_170178 2.0kb downstream 2.0kb downstream 2000 false scaffold_17: 1349981-1351980 Coccomyxa subellipsoidea C-169
estExt_Genewise1Plus.C_170178 5.0kb upstream 5.0kb upstream 7422 true scaffold_17: 1351981-1359402 Coccomyxa subellipsoidea C-169
estExt_Genewise1Plus.C_170178 5.0kb upstream 5.0kb upstream 5000 false scaffold_17: 1354403-1359402 Coccomyxa subellipsoidea C-169
estExt_Genewise1Plus.C_170178 5.0kb downstream 5.0kb downstream 7422 true scaffold_17: 1346981-1354402 Coccomyxa subellipsoidea C-169
estExt_Genewise1Plus.C_170178 5.0kb downstream 5.0kb downstream 5000 false scaffold_17: 1346981-1351980 Coccomyxa subellipsoidea C-169
estExt_Genewise1Plus.C_170178 10.0kb upstream 10.0kb upstream 12422 true scaffold_17: 1351981-1364402 Coccomyxa subellipsoidea C-169
estExt_Genewise1Plus.C_170178 10.0kb upstream 10.0kb upstream 10000 false scaffold_17: 1354403-1364402 Coccomyxa subellipsoidea C-169
estExt_Genewise1Plus.C_170178 10.0kb downstream 10.0kb downstream 12422 true scaffold_17: 1341981-1354402 Coccomyxa subellipsoidea C-169
estExt_Genewise1Plus.C_170178 10.0kb downstream 10.0kb downstream 10000 false scaffold_17: 1341981-1351980 Coccomyxa subellipsoidea C-169

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124110276 5260 Chlorophyte View MSA
123425295 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier