Gene : AL1G33080 A. lyrata v2.1
Defline:  (1 of 59) PF01535//PF13041//PF14432 - PPR repeat (PPR) // PPR repeat family (PPR_2) // DYW family of nucleic acid deaminases (DYW_deaminase) Genomic Order:  2192
Name:  ? AL1G33080 Secondary Identifier:  ? PAC:35930532
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3 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AL1G33080 0.5kb upstream 0.5kb upstream 2989   true scaffold_1: 8630055-8633043 Arabidopsis lyrata
AL1G33080 0.5kb upstream 0.5kb upstream 500   false scaffold_1: 8630055-8630554 Arabidopsis lyrata
AL1G33080 0.5kb downstream 0.5kb downstream 2989   true scaffold_1: 8630555-8633543 Arabidopsis lyrata
AL1G33080 0.5kb downstream 0.5kb downstream 500   false scaffold_1: 8633044-8633543 Arabidopsis lyrata
AL1G33080 1.0kb upstream 1.0kb upstream 3489   true scaffold_1: 8629555-8633043 Arabidopsis lyrata
AL1G33080 1.0kb upstream 1.0kb upstream 1000   false scaffold_1: 8629555-8630554 Arabidopsis lyrata
AL1G33080 1.0kb downstream 1.0kb downstream 3489   true scaffold_1: 8630555-8634043 Arabidopsis lyrata
AL1G33080 1.0kb downstream 1.0kb downstream 1000   false scaffold_1: 8633044-8634043 Arabidopsis lyrata
AL1G33080 2.0kb upstream 2.0kb upstream 4489   true scaffold_1: 8628555-8633043 Arabidopsis lyrata
AL1G33080 2.0kb upstream 2.0kb upstream 2000   false scaffold_1: 8628555-8630554 Arabidopsis lyrata
AL1G33080 2.0kb downstream 2.0kb downstream 4489   true scaffold_1: 8630555-8635043 Arabidopsis lyrata
AL1G33080 2.0kb downstream 2.0kb downstream 2000   false scaffold_1: 8633044-8635043 Arabidopsis lyrata
AL1G33080 5.0kb upstream 5.0kb upstream 7489   true scaffold_1: 8625555-8633043 Arabidopsis lyrata
AL1G33080 5.0kb upstream 5.0kb upstream 5000   false scaffold_1: 8625555-8630554 Arabidopsis lyrata
AL1G33080 5.0kb downstream 5.0kb downstream 7489   true scaffold_1: 8630555-8638043 Arabidopsis lyrata
AL1G33080 5.0kb downstream 5.0kb downstream 5000   false scaffold_1: 8633044-8638043 Arabidopsis lyrata
AL1G33080 10.0kb upstream 10.0kb upstream 12489   true scaffold_1: 8620555-8633043 Arabidopsis lyrata
AL1G33080 10.0kb upstream 10.0kb upstream 10000   false scaffold_1: 8620555-8630554 Arabidopsis lyrata
AL1G33080 10.0kb downstream 10.0kb downstream 12489   true scaffold_1: 8630555-8643043 Arabidopsis lyrata
AL1G33080 10.0kb downstream 10.0kb downstream 10000   false scaffold_1: 8633044-8643043 Arabidopsis lyrata

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122363633 5261 Brassicaceae View MSA
123828553 5264 Brassicales-Malvales View MSA
124321539 5266 SBM View MSA
124252627 5268 Malvidae View MSA
124064804 5270 Rosid View MSA
123740477 5271 Pentapetalae View MSA
122791642 5272 Eudicot View MSA
122051669 5273 Angiosperm View MSA
123429046 5275 Viridiplantae View MSA
121351733 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain