Gene : AL1G36860 A. lyrata v2.1

Defline:  (1 of 3) K01835 - phosphoglucomutase (pgm) Genomic Order:  2547
Name:  ? AL1G36860 Secondary Identifier:  ? PAC:35932474

Sequence Feature Displayer

Ontology Annotation Displayer

8 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Alyrata GLUCOSE1PMETAB-PWY Arabidopsis lyrata pathologic  
Alyrata GLYCOGENSYNTH-PWY Arabidopsis lyrata pathologic  
Alyrata PWY-3801 Arabidopsis lyrata pathologic  
Alyrata PWY-622 Arabidopsis lyrata pathologic  
Alyrata PWY66-422 Arabidopsis lyrata pathologic  
Alyrata PWY-7238 Arabidopsis lyrata pathologic  
Alyrata PWY-7343 Arabidopsis lyrata pathologic  
Alyrata SUCSYN-PWY Arabidopsis lyrata pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AL1G36860 0.5kb upstream 0.5kb upstream 5165   true scaffold_1: 10264447-10269611 Arabidopsis lyrata
AL1G36860 0.5kb upstream 0.5kb upstream 500   false scaffold_1: 10264447-10264946 Arabidopsis lyrata
AL1G36860 0.5kb downstream 0.5kb downstream 5165   true scaffold_1: 10264947-10270111 Arabidopsis lyrata
AL1G36860 0.5kb downstream 0.5kb downstream 500   false scaffold_1: 10269612-10270111 Arabidopsis lyrata
AL1G36860 1.0kb upstream 1.0kb upstream 5665   true scaffold_1: 10263947-10269611 Arabidopsis lyrata
AL1G36860 1.0kb upstream 1.0kb upstream 1000   false scaffold_1: 10263947-10264946 Arabidopsis lyrata
AL1G36860 1.0kb downstream 1.0kb downstream 5665   true scaffold_1: 10264947-10270611 Arabidopsis lyrata
AL1G36860 1.0kb downstream 1.0kb downstream 1000   false scaffold_1: 10269612-10270611 Arabidopsis lyrata
AL1G36860 2.0kb upstream 2.0kb upstream 6665   true scaffold_1: 10262947-10269611 Arabidopsis lyrata
AL1G36860 2.0kb upstream 2.0kb upstream 2000   false scaffold_1: 10262947-10264946 Arabidopsis lyrata
AL1G36860 2.0kb downstream 2.0kb downstream 6665   true scaffold_1: 10264947-10271611 Arabidopsis lyrata
AL1G36860 2.0kb downstream 2.0kb downstream 2000   false scaffold_1: 10269612-10271611 Arabidopsis lyrata
AL1G36860 5.0kb upstream 5.0kb upstream 9665   true scaffold_1: 10259947-10269611 Arabidopsis lyrata
AL1G36860 5.0kb upstream 5.0kb upstream 5000   false scaffold_1: 10259947-10264946 Arabidopsis lyrata
AL1G36860 5.0kb downstream 5.0kb downstream 9665   true scaffold_1: 10264947-10274611 Arabidopsis lyrata
AL1G36860 5.0kb downstream 5.0kb downstream 5000   false scaffold_1: 10269612-10274611 Arabidopsis lyrata
AL1G36860 10.0kb upstream 10.0kb upstream 14665   true scaffold_1: 10254947-10269611 Arabidopsis lyrata
AL1G36860 10.0kb upstream 10.0kb upstream 10000   false scaffold_1: 10254947-10264946 Arabidopsis lyrata
AL1G36860 10.0kb downstream 10.0kb downstream 14665   true scaffold_1: 10264947-10279611 Arabidopsis lyrata
AL1G36860 10.0kb downstream 10.0kb downstream 10000   false scaffold_1: 10269612-10279611 Arabidopsis lyrata

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122364390 5261 Brassicaceae View MSA
123835209 5264 Brassicales-Malvales View MSA
124342115 5266 SBM View MSA
124253593 5268 Malvidae View MSA
124065382 5270 Rosid View MSA
123740036 5271 Pentapetalae View MSA
122791577 5272 Eudicot View MSA
122046067 5273 Angiosperm View MSA
121346784 5274 Embryophyte View MSA
123426013 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain