Gene : AL1G36600 A. lyrata v2.1

Defline:  (1 of 2) PTHR23315:SF52 - U-BOX DOMAIN-CONTAINING PROTEIN 10-RELATED Genomic Order:  2521
Name:  ? AL1G36600 Secondary Identifier:  ? PAC:35931252

Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Alyrata PWY-7511 Arabidopsis lyrata pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AL1G36600 0.5kb upstream 0.5kb upstream 2932   true scaffold_1: 10155378-10158309 Arabidopsis lyrata
AL1G36600 0.5kb upstream 0.5kb upstream 500   false scaffold_1: 10155378-10155877 Arabidopsis lyrata
AL1G36600 0.5kb downstream 0.5kb downstream 2932   true scaffold_1: 10155878-10158809 Arabidopsis lyrata
AL1G36600 0.5kb downstream 0.5kb downstream 500   false scaffold_1: 10158310-10158809 Arabidopsis lyrata
AL1G36600 1.0kb upstream 1.0kb upstream 3432   true scaffold_1: 10154878-10158309 Arabidopsis lyrata
AL1G36600 1.0kb upstream 1.0kb upstream 1000   false scaffold_1: 10154878-10155877 Arabidopsis lyrata
AL1G36600 1.0kb downstream 1.0kb downstream 3432   true scaffold_1: 10155878-10159309 Arabidopsis lyrata
AL1G36600 1.0kb downstream 1.0kb downstream 1000   false scaffold_1: 10158310-10159309 Arabidopsis lyrata
AL1G36600 2.0kb upstream 2.0kb upstream 4432   true scaffold_1: 10153878-10158309 Arabidopsis lyrata
AL1G36600 2.0kb upstream 2.0kb upstream 2000   false scaffold_1: 10153878-10155877 Arabidopsis lyrata
AL1G36600 2.0kb downstream 2.0kb downstream 4432   true scaffold_1: 10155878-10160309 Arabidopsis lyrata
AL1G36600 2.0kb downstream 2.0kb downstream 2000   false scaffold_1: 10158310-10160309 Arabidopsis lyrata
AL1G36600 5.0kb upstream 5.0kb upstream 7432   true scaffold_1: 10150878-10158309 Arabidopsis lyrata
AL1G36600 5.0kb upstream 5.0kb upstream 5000   false scaffold_1: 10150878-10155877 Arabidopsis lyrata
AL1G36600 5.0kb downstream 5.0kb downstream 7432   true scaffold_1: 10155878-10163309 Arabidopsis lyrata
AL1G36600 5.0kb downstream 5.0kb downstream 5000   false scaffold_1: 10158310-10163309 Arabidopsis lyrata
AL1G36600 10.0kb upstream 10.0kb upstream 12432   true scaffold_1: 10145878-10158309 Arabidopsis lyrata
AL1G36600 10.0kb upstream 10.0kb upstream 10000   false scaffold_1: 10145878-10155877 Arabidopsis lyrata
AL1G36600 10.0kb downstream 10.0kb downstream 12432   true scaffold_1: 10155878-10168309 Arabidopsis lyrata
AL1G36600 10.0kb downstream 10.0kb downstream 10000   false scaffold_1: 10158310-10168309 Arabidopsis lyrata

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122366355 5261 Brassicaceae View MSA
123835937 5264 Brassicales-Malvales View MSA
124339411 5266 SBM View MSA
124237538 5268 Malvidae View MSA
124062819 5270 Rosid View MSA
123743592 5271 Pentapetalae View MSA
122789387 5272 Eudicot View MSA
122050659 5273 Angiosperm View MSA
121312051 5274 Embryophyte View MSA
123428864 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain