Gene : AL1G40140 A. lyrata v2.1

Defline:  (1 of 5) PTHR10161 - TARTRATE-RESISTANT ACID PHOSPHATASE TYPE 5 Genomic Order:  2849
Name:  ? AL1G40140 Secondary Identifier:  ? PAC:35930730

Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Alyrata PWY-5083 Arabidopsis lyrata pathologic  
Alyrata PWY-6348 Arabidopsis lyrata pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AL1G40140 0.5kb upstream 0.5kb upstream 2385   true scaffold_1: 11720243-11722627 Arabidopsis lyrata
AL1G40140 0.5kb upstream 0.5kb upstream 500   false scaffold_1: 11720243-11720742 Arabidopsis lyrata
AL1G40140 0.5kb downstream 0.5kb downstream 2385   true scaffold_1: 11720743-11723127 Arabidopsis lyrata
AL1G40140 0.5kb downstream 0.5kb downstream 500   false scaffold_1: 11722628-11723127 Arabidopsis lyrata
AL1G40140 1.0kb upstream 1.0kb upstream 2885   true scaffold_1: 11719743-11722627 Arabidopsis lyrata
AL1G40140 1.0kb upstream 1.0kb upstream 1000   false scaffold_1: 11719743-11720742 Arabidopsis lyrata
AL1G40140 1.0kb downstream 1.0kb downstream 2885   true scaffold_1: 11720743-11723627 Arabidopsis lyrata
AL1G40140 1.0kb downstream 1.0kb downstream 1000   false scaffold_1: 11722628-11723627 Arabidopsis lyrata
AL1G40140 2.0kb upstream 2.0kb upstream 3885   true scaffold_1: 11718743-11722627 Arabidopsis lyrata
AL1G40140 2.0kb upstream 2.0kb upstream 2000   false scaffold_1: 11718743-11720742 Arabidopsis lyrata
AL1G40140 2.0kb downstream 2.0kb downstream 3885   true scaffold_1: 11720743-11724627 Arabidopsis lyrata
AL1G40140 2.0kb downstream 2.0kb downstream 2000   false scaffold_1: 11722628-11724627 Arabidopsis lyrata
AL1G40140 5.0kb upstream 5.0kb upstream 6885   true scaffold_1: 11715743-11722627 Arabidopsis lyrata
AL1G40140 5.0kb upstream 5.0kb upstream 5000   false scaffold_1: 11715743-11720742 Arabidopsis lyrata
AL1G40140 5.0kb downstream 5.0kb downstream 6885   true scaffold_1: 11720743-11727627 Arabidopsis lyrata
AL1G40140 5.0kb downstream 5.0kb downstream 5000   false scaffold_1: 11722628-11727627 Arabidopsis lyrata
AL1G40140 10.0kb upstream 10.0kb upstream 11885   true scaffold_1: 11710743-11722627 Arabidopsis lyrata
AL1G40140 10.0kb upstream 10.0kb upstream 10000   false scaffold_1: 11710743-11720742 Arabidopsis lyrata
AL1G40140 10.0kb downstream 10.0kb downstream 11885   true scaffold_1: 11720743-11732627 Arabidopsis lyrata
AL1G40140 10.0kb downstream 10.0kb downstream 10000   false scaffold_1: 11722628-11732627 Arabidopsis lyrata

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122364034 5261 Brassicaceae View MSA
123841578 5264 Brassicales-Malvales View MSA
124349660 5266 SBM View MSA
124248897 5268 Malvidae View MSA
124061132 5270 Rosid View MSA
123743122 5271 Pentapetalae View MSA
122795933 5272 Eudicot View MSA
122045102 5273 Angiosperm View MSA
121351076 5274 Embryophyte View MSA
123427142 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain