Gene : AL1G39780 A. lyrata v2.1
Defline:  (1 of 5) PTHR12608 - TRANSMEMBRANE PROTEIN HTP-1 RELATED Genomic Order:  2815
Name:  ? AL1G39780 Secondary Identifier:  ? PAC:35932362
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Genomics

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Expression

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3 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AL1G39780 0.5kb upstream 0.5kb upstream 3022   true scaffold_1: 11546913-11549934 Arabidopsis lyrata
AL1G39780 0.5kb upstream 0.5kb upstream 500   false scaffold_1: 11549435-11549934 Arabidopsis lyrata
AL1G39780 0.5kb downstream 0.5kb downstream 3022   true scaffold_1: 11546413-11549434 Arabidopsis lyrata
AL1G39780 0.5kb downstream 0.5kb downstream 500   false scaffold_1: 11546413-11546912 Arabidopsis lyrata
AL1G39780 1.0kb upstream 1.0kb upstream 3522   true scaffold_1: 11546913-11550434 Arabidopsis lyrata
AL1G39780 1.0kb upstream 1.0kb upstream 1000   false scaffold_1: 11549435-11550434 Arabidopsis lyrata
AL1G39780 1.0kb downstream 1.0kb downstream 3522   true scaffold_1: 11545913-11549434 Arabidopsis lyrata
AL1G39780 1.0kb downstream 1.0kb downstream 1000   false scaffold_1: 11545913-11546912 Arabidopsis lyrata
AL1G39780 2.0kb upstream 2.0kb upstream 4522   true scaffold_1: 11546913-11551434 Arabidopsis lyrata
AL1G39780 2.0kb upstream 2.0kb upstream 2000   false scaffold_1: 11549435-11551434 Arabidopsis lyrata
AL1G39780 2.0kb downstream 2.0kb downstream 4522   true scaffold_1: 11544913-11549434 Arabidopsis lyrata
AL1G39780 2.0kb downstream 2.0kb downstream 2000   false scaffold_1: 11544913-11546912 Arabidopsis lyrata
AL1G39780 5.0kb upstream 5.0kb upstream 7522   true scaffold_1: 11546913-11554434 Arabidopsis lyrata
AL1G39780 5.0kb upstream 5.0kb upstream 5000   false scaffold_1: 11549435-11554434 Arabidopsis lyrata
AL1G39780 5.0kb downstream 5.0kb downstream 7522   true scaffold_1: 11541913-11549434 Arabidopsis lyrata
AL1G39780 5.0kb downstream 5.0kb downstream 5000   false scaffold_1: 11541913-11546912 Arabidopsis lyrata
AL1G39780 10.0kb upstream 10.0kb upstream 12522   true scaffold_1: 11546913-11559434 Arabidopsis lyrata
AL1G39780 10.0kb upstream 10.0kb upstream 10000   false scaffold_1: 11549435-11559434 Arabidopsis lyrata
AL1G39780 10.0kb downstream 10.0kb downstream 12522   true scaffold_1: 11536913-11549434 Arabidopsis lyrata
AL1G39780 10.0kb downstream 10.0kb downstream 10000   false scaffold_1: 11536913-11546912 Arabidopsis lyrata

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122377119 5261 Brassicaceae View MSA
123832499 5264 Brassicales-Malvales View MSA
124345020 5266 SBM View MSA
124245050 5268 Malvidae View MSA
124060465 5270 Rosid View MSA
123745262 5271 Pentapetalae View MSA
122786171 5272 Eudicot View MSA
122046225 5273 Angiosperm View MSA
121344721 5274 Embryophyte View MSA
123428725 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain