Gene : AL1G44564 A. lyrata v2.1

Defline:  (1 of 1) 6.2.1.26 - o-succinylbenzoate--CoA ligase / OSB-CoA synthetase Genomic Order:  3239
Name:  ? AL1G44564 Secondary Identifier:  ? PAC:35932604

Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Alyrata PWY-5837 Arabidopsis lyrata pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AL1G44564 0.5kb upstream 0.5kb upstream 3497   true scaffold_1: 13712156-13715652 Arabidopsis lyrata
AL1G44564 0.5kb upstream 0.5kb upstream 500   false scaffold_1: 13712156-13712655 Arabidopsis lyrata
AL1G44564 0.5kb downstream 0.5kb downstream 3497   true scaffold_1: 13712656-13716152 Arabidopsis lyrata
AL1G44564 0.5kb downstream 0.5kb downstream 500   false scaffold_1: 13715653-13716152 Arabidopsis lyrata
AL1G44564 1.0kb upstream 1.0kb upstream 3997   true scaffold_1: 13711656-13715652 Arabidopsis lyrata
AL1G44564 1.0kb upstream 1.0kb upstream 1000   false scaffold_1: 13711656-13712655 Arabidopsis lyrata
AL1G44564 1.0kb downstream 1.0kb downstream 3997   true scaffold_1: 13712656-13716652 Arabidopsis lyrata
AL1G44564 1.0kb downstream 1.0kb downstream 1000   false scaffold_1: 13715653-13716652 Arabidopsis lyrata
AL1G44564 2.0kb upstream 2.0kb upstream 4997   true scaffold_1: 13710656-13715652 Arabidopsis lyrata
AL1G44564 2.0kb upstream 2.0kb upstream 2000   false scaffold_1: 13710656-13712655 Arabidopsis lyrata
AL1G44564 2.0kb downstream 2.0kb downstream 4997   true scaffold_1: 13712656-13717652 Arabidopsis lyrata
AL1G44564 2.0kb downstream 2.0kb downstream 2000   false scaffold_1: 13715653-13717652 Arabidopsis lyrata
AL1G44564 5.0kb upstream 5.0kb upstream 7997   true scaffold_1: 13707656-13715652 Arabidopsis lyrata
AL1G44564 5.0kb upstream 5.0kb upstream 5000   false scaffold_1: 13707656-13712655 Arabidopsis lyrata
AL1G44564 5.0kb downstream 5.0kb downstream 7997   true scaffold_1: 13712656-13720652 Arabidopsis lyrata
AL1G44564 5.0kb downstream 5.0kb downstream 5000   false scaffold_1: 13715653-13720652 Arabidopsis lyrata
AL1G44564 10.0kb upstream 10.0kb upstream 12997   true scaffold_1: 13702656-13715652 Arabidopsis lyrata
AL1G44564 10.0kb upstream 10.0kb upstream 10000   false scaffold_1: 13702656-13712655 Arabidopsis lyrata
AL1G44564 10.0kb downstream 10.0kb downstream 12997   true scaffold_1: 13712656-13725652 Arabidopsis lyrata
AL1G44564 10.0kb downstream 10.0kb downstream 10000   false scaffold_1: 13715653-13725652 Arabidopsis lyrata

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122372507 5261 Brassicaceae View MSA
123834276 5264 Brassicales-Malvales View MSA
124340453 5266 SBM View MSA
124243715 5268 Malvidae View MSA
124061989 5270 Rosid View MSA
123752148 5271 Pentapetalae View MSA
122787718 5272 Eudicot View MSA
122042580 5273 Angiosperm View MSA
121346156 5274 Embryophyte View MSA
123427881 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain