Gene : AL1G48720 A. lyrata v2.1
Defline:  (1 of 1) PTHR12161:SF21 - REGULATOR OF VPS4 ACTIVITY IN THE MVB PATHWAY PROTEIN Genomic Order:  3603
Name:  ? AL1G48720 Secondary Identifier:  ? PAC:35934993
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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3 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AL1G48720 0.5kb upstream 0.5kb upstream 3695   true scaffold_1: 16019364-16023058 Arabidopsis lyrata
AL1G48720 0.5kb upstream 0.5kb upstream 500   false scaffold_1: 16022559-16023058 Arabidopsis lyrata
AL1G48720 0.5kb downstream 0.5kb downstream 3695   true scaffold_1: 16018864-16022558 Arabidopsis lyrata
AL1G48720 0.5kb downstream 0.5kb downstream 500   false scaffold_1: 16018864-16019363 Arabidopsis lyrata
AL1G48720 1.0kb upstream 1.0kb upstream 4195   true scaffold_1: 16019364-16023558 Arabidopsis lyrata
AL1G48720 1.0kb upstream 1.0kb upstream 1000   false scaffold_1: 16022559-16023558 Arabidopsis lyrata
AL1G48720 1.0kb downstream 1.0kb downstream 4195   true scaffold_1: 16018364-16022558 Arabidopsis lyrata
AL1G48720 1.0kb downstream 1.0kb downstream 1000   false scaffold_1: 16018364-16019363 Arabidopsis lyrata
AL1G48720 2.0kb upstream 2.0kb upstream 5195   true scaffold_1: 16019364-16024558 Arabidopsis lyrata
AL1G48720 2.0kb upstream 2.0kb upstream 2000   false scaffold_1: 16022559-16024558 Arabidopsis lyrata
AL1G48720 2.0kb downstream 2.0kb downstream 5195   true scaffold_1: 16017364-16022558 Arabidopsis lyrata
AL1G48720 2.0kb downstream 2.0kb downstream 2000   false scaffold_1: 16017364-16019363 Arabidopsis lyrata
AL1G48720 5.0kb upstream 5.0kb upstream 8195   true scaffold_1: 16019364-16027558 Arabidopsis lyrata
AL1G48720 5.0kb upstream 5.0kb upstream 5000   false scaffold_1: 16022559-16027558 Arabidopsis lyrata
AL1G48720 5.0kb downstream 5.0kb downstream 8195   true scaffold_1: 16014364-16022558 Arabidopsis lyrata
AL1G48720 5.0kb downstream 5.0kb downstream 5000   false scaffold_1: 16014364-16019363 Arabidopsis lyrata
AL1G48720 10.0kb upstream 10.0kb upstream 13195   true scaffold_1: 16019364-16032558 Arabidopsis lyrata
AL1G48720 10.0kb upstream 10.0kb upstream 10000   false scaffold_1: 16022559-16032558 Arabidopsis lyrata
AL1G48720 10.0kb downstream 10.0kb downstream 13195   true scaffold_1: 16009364-16022558 Arabidopsis lyrata
AL1G48720 10.0kb downstream 10.0kb downstream 10000   false scaffold_1: 16009364-16019363 Arabidopsis lyrata

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122366056 5261 Brassicaceae View MSA
123840797 5264 Brassicales-Malvales View MSA
124337965 5266 SBM View MSA
124245103 5268 Malvidae View MSA
124068076 5270 Rosid View MSA
123736868 5271 Pentapetalae View MSA
122789571 5272 Eudicot View MSA
122045314 5273 Angiosperm View MSA
121350449 5274 Embryophyte View MSA
123424640 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain