Gene : AL1G50880 A. lyrata v2.1

Defline:  (1 of 2) 6.3.4.14 - Biotin carboxylase Genomic Order:  3785
Name:  ? AL1G50880 Secondary Identifier:  ? PAC:35932126

Sequence Feature Displayer

Ontology Annotation Displayer

4 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Alyrata PWY0-1264 Arabidopsis lyrata pathologic  
Alyrata PWY-4381 Arabidopsis lyrata pathologic  
Alyrata PWY-5156 Arabidopsis lyrata pathologic  
Alyrata PWY-7388 Arabidopsis lyrata pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AL1G50880 0.5kb upstream 0.5kb upstream 11494   true scaffold_1: 17800550-17812043 Arabidopsis lyrata
AL1G50880 0.5kb upstream 0.5kb upstream 500   false scaffold_1: 17800550-17801049 Arabidopsis lyrata
AL1G50880 0.5kb downstream 0.5kb downstream 11494   true scaffold_1: 17801050-17812543 Arabidopsis lyrata
AL1G50880 0.5kb downstream 0.5kb downstream 500   false scaffold_1: 17812044-17812543 Arabidopsis lyrata
AL1G50880 1.0kb upstream 1.0kb upstream 11994   true scaffold_1: 17800050-17812043 Arabidopsis lyrata
AL1G50880 1.0kb upstream 1.0kb upstream 1000   false scaffold_1: 17800050-17801049 Arabidopsis lyrata
AL1G50880 1.0kb downstream 1.0kb downstream 11994   true scaffold_1: 17801050-17813043 Arabidopsis lyrata
AL1G50880 1.0kb downstream 1.0kb downstream 1000   false scaffold_1: 17812044-17813043 Arabidopsis lyrata
AL1G50880 2.0kb upstream 2.0kb upstream 12994   true scaffold_1: 17799050-17812043 Arabidopsis lyrata
AL1G50880 2.0kb upstream 2.0kb upstream 2000   false scaffold_1: 17799050-17801049 Arabidopsis lyrata
AL1G50880 2.0kb downstream 2.0kb downstream 12994   true scaffold_1: 17801050-17814043 Arabidopsis lyrata
AL1G50880 2.0kb downstream 2.0kb downstream 2000   false scaffold_1: 17812044-17814043 Arabidopsis lyrata
AL1G50880 5.0kb upstream 5.0kb upstream 15994   true scaffold_1: 17796050-17812043 Arabidopsis lyrata
AL1G50880 5.0kb upstream 5.0kb upstream 5000   false scaffold_1: 17796050-17801049 Arabidopsis lyrata
AL1G50880 5.0kb downstream 5.0kb downstream 15994   true scaffold_1: 17801050-17817043 Arabidopsis lyrata
AL1G50880 5.0kb downstream 5.0kb downstream 5000   false scaffold_1: 17812044-17817043 Arabidopsis lyrata
AL1G50880 10.0kb upstream 10.0kb upstream 20994   true scaffold_1: 17791050-17812043 Arabidopsis lyrata
AL1G50880 10.0kb upstream 10.0kb upstream 10000   false scaffold_1: 17791050-17801049 Arabidopsis lyrata
AL1G50880 10.0kb downstream 10.0kb downstream 20994   true scaffold_1: 17801050-17822043 Arabidopsis lyrata
AL1G50880 10.0kb downstream 10.0kb downstream 10000   false scaffold_1: 17812044-17822043 Arabidopsis lyrata

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041353 5273 Angiosperm View MSA
122381683 5261 Brassicaceae View MSA
123837722 5264 Brassicales-Malvales View MSA
124341961 5266 SBM View MSA
124249572 5268 Malvidae View MSA
124064007 5270 Rosid View MSA
123738277 5271 Pentapetalae View MSA
122788155 5272 Eudicot View MSA
121349093 5274 Embryophyte View MSA
123428824 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain