Gene : AL1G49860 A. lyrata v2.1

Defline:  (1 of 2) PTHR31279:SF3 - (PHI-1) PROTEIN, PUTATIVE-RELATED Genomic Order:  3708
Name:  ? AL1G49860 Secondary Identifier:  ? PAC:35933310

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AL1G49860 0.5kb upstream 0.5kb upstream 1658   true scaffold_1: 16917093-16918750 Arabidopsis lyrata
AL1G49860 0.5kb upstream 0.5kb upstream 500   false scaffold_1: 16917093-16917592 Arabidopsis lyrata
AL1G49860 0.5kb downstream 0.5kb downstream 1658   true scaffold_1: 16917593-16919250 Arabidopsis lyrata
AL1G49860 0.5kb downstream 0.5kb downstream 500   false scaffold_1: 16918751-16919250 Arabidopsis lyrata
AL1G49860 1.0kb upstream 1.0kb upstream 2158   true scaffold_1: 16916593-16918750 Arabidopsis lyrata
AL1G49860 1.0kb upstream 1.0kb upstream 1000   false scaffold_1: 16916593-16917592 Arabidopsis lyrata
AL1G49860 1.0kb downstream 1.0kb downstream 2158   true scaffold_1: 16917593-16919750 Arabidopsis lyrata
AL1G49860 1.0kb downstream 1.0kb downstream 1000   false scaffold_1: 16918751-16919750 Arabidopsis lyrata
AL1G49860 2.0kb upstream 2.0kb upstream 3158   true scaffold_1: 16915593-16918750 Arabidopsis lyrata
AL1G49860 2.0kb upstream 2.0kb upstream 2000   false scaffold_1: 16915593-16917592 Arabidopsis lyrata
AL1G49860 2.0kb downstream 2.0kb downstream 3158   true scaffold_1: 16917593-16920750 Arabidopsis lyrata
AL1G49860 2.0kb downstream 2.0kb downstream 2000   false scaffold_1: 16918751-16920750 Arabidopsis lyrata
AL1G49860 5.0kb upstream 5.0kb upstream 6158   true scaffold_1: 16912593-16918750 Arabidopsis lyrata
AL1G49860 5.0kb upstream 5.0kb upstream 5000   false scaffold_1: 16912593-16917592 Arabidopsis lyrata
AL1G49860 5.0kb downstream 5.0kb downstream 6158   true scaffold_1: 16917593-16923750 Arabidopsis lyrata
AL1G49860 5.0kb downstream 5.0kb downstream 5000   false scaffold_1: 16918751-16923750 Arabidopsis lyrata
AL1G49860 10.0kb upstream 10.0kb upstream 11158   true scaffold_1: 16907593-16918750 Arabidopsis lyrata
AL1G49860 10.0kb upstream 10.0kb upstream 10000   false scaffold_1: 16907593-16917592 Arabidopsis lyrata
AL1G49860 10.0kb downstream 10.0kb downstream 11158   true scaffold_1: 16917593-16928750 Arabidopsis lyrata
AL1G49860 10.0kb downstream 10.0kb downstream 10000   false scaffold_1: 16918751-16928750 Arabidopsis lyrata

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122376556 5261 Brassicaceae View MSA
123801289 5264 Brassicales-Malvales View MSA
124298611 5266 SBM View MSA
124252276 5268 Malvidae View MSA
124074854 5270 Rosid View MSA
123747459 5271 Pentapetalae View MSA
122794383 5272 Eudicot View MSA
122046837 5273 Angiosperm View MSA
121351467 5274 Embryophyte View MSA
123382178 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain