Gene : AL1G52270 A. lyrata v2.1

Defline:  (1 of 2) 4.2.1.24 - Porphobilinogen synthase / Delta-aminolevulinic acid dehydratase Genomic Order:  3905
Name:  ? AL1G52270 Secondary Identifier:  ? PAC:35933380

Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Alyrata PWY-5188 Arabidopsis lyrata pathologic  
Alyrata PWY-5918 Arabidopsis lyrata pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AL1G52270 0.5kb upstream 0.5kb upstream 3536   true scaffold_1: 22621449-22624984 Arabidopsis lyrata
AL1G52270 0.5kb upstream 0.5kb upstream 500   false scaffold_1: 22621449-22621948 Arabidopsis lyrata
AL1G52270 0.5kb downstream 0.5kb downstream 3536   true scaffold_1: 22621949-22625484 Arabidopsis lyrata
AL1G52270 0.5kb downstream 0.5kb downstream 500   false scaffold_1: 22624985-22625484 Arabidopsis lyrata
AL1G52270 1.0kb upstream 1.0kb upstream 4036   true scaffold_1: 22620949-22624984 Arabidopsis lyrata
AL1G52270 1.0kb upstream 1.0kb upstream 1000   false scaffold_1: 22620949-22621948 Arabidopsis lyrata
AL1G52270 1.0kb downstream 1.0kb downstream 4036   true scaffold_1: 22621949-22625984 Arabidopsis lyrata
AL1G52270 1.0kb downstream 1.0kb downstream 1000   false scaffold_1: 22624985-22625984 Arabidopsis lyrata
AL1G52270 2.0kb upstream 2.0kb upstream 5036   true scaffold_1: 22619949-22624984 Arabidopsis lyrata
AL1G52270 2.0kb upstream 2.0kb upstream 2000   false scaffold_1: 22619949-22621948 Arabidopsis lyrata
AL1G52270 2.0kb downstream 2.0kb downstream 5036   true scaffold_1: 22621949-22626984 Arabidopsis lyrata
AL1G52270 2.0kb downstream 2.0kb downstream 2000   false scaffold_1: 22624985-22626984 Arabidopsis lyrata
AL1G52270 5.0kb upstream 5.0kb upstream 8036   true scaffold_1: 22616949-22624984 Arabidopsis lyrata
AL1G52270 5.0kb upstream 5.0kb upstream 5000   false scaffold_1: 22616949-22621948 Arabidopsis lyrata
AL1G52270 5.0kb downstream 5.0kb downstream 8036   true scaffold_1: 22621949-22629984 Arabidopsis lyrata
AL1G52270 5.0kb downstream 5.0kb downstream 5000   false scaffold_1: 22624985-22629984 Arabidopsis lyrata
AL1G52270 10.0kb upstream 10.0kb upstream 13036   true scaffold_1: 22611949-22624984 Arabidopsis lyrata
AL1G52270 10.0kb upstream 10.0kb upstream 10000   false scaffold_1: 22611949-22621948 Arabidopsis lyrata
AL1G52270 10.0kb downstream 10.0kb downstream 13036   true scaffold_1: 22621949-22634984 Arabidopsis lyrata
AL1G52270 10.0kb downstream 10.0kb downstream 10000   false scaffold_1: 22624985-22634984 Arabidopsis lyrata

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121510346 5273 Angiosperm View MSA
122362445 5261 Brassicaceae View MSA
123798367 5264 Brassicales-Malvales View MSA
124296012 5266 SBM View MSA
124148292 5268 Malvidae View MSA
123874315 5270 Rosid View MSA
123458308 5271 Pentapetalae View MSA
122493714 5272 Eudicot View MSA
120783448 5274 Embryophyte View MSA
122825458 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain