Gene : AL1G55732 A. lyrata v2.1

Defline:  (1 of 1) PTHR23023:SF135 - INDOLE-3-PYRUVATE MONOOXYGENASE YUCCA10-RELATED Genomic Order:  4208
Name:  ? AL1G55732 Secondary Identifier:  ? PAC:35932734

Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Alyrata PWYDQC-4 Arabidopsis lyrata pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AL1G55732 0.5kb upstream 0.5kb upstream 2573   true scaffold_1: 24989353-24991925 Arabidopsis lyrata
AL1G55732 0.5kb upstream 0.5kb upstream 500   false scaffold_1: 24989353-24989852 Arabidopsis lyrata
AL1G55732 0.5kb downstream 0.5kb downstream 2573   true scaffold_1: 24989853-24992425 Arabidopsis lyrata
AL1G55732 0.5kb downstream 0.5kb downstream 500   false scaffold_1: 24991926-24992425 Arabidopsis lyrata
AL1G55732 1.0kb upstream 1.0kb upstream 3073   true scaffold_1: 24988853-24991925 Arabidopsis lyrata
AL1G55732 1.0kb upstream 1.0kb upstream 1000   false scaffold_1: 24988853-24989852 Arabidopsis lyrata
AL1G55732 1.0kb downstream 1.0kb downstream 3073   true scaffold_1: 24989853-24992925 Arabidopsis lyrata
AL1G55732 1.0kb downstream 1.0kb downstream 1000   false scaffold_1: 24991926-24992925 Arabidopsis lyrata
AL1G55732 2.0kb upstream 2.0kb upstream 4073   true scaffold_1: 24987853-24991925 Arabidopsis lyrata
AL1G55732 2.0kb upstream 2.0kb upstream 2000   false scaffold_1: 24987853-24989852 Arabidopsis lyrata
AL1G55732 2.0kb downstream 2.0kb downstream 4073   true scaffold_1: 24989853-24993925 Arabidopsis lyrata
AL1G55732 2.0kb downstream 2.0kb downstream 2000   false scaffold_1: 24991926-24993925 Arabidopsis lyrata
AL1G55732 5.0kb upstream 5.0kb upstream 7073   true scaffold_1: 24984853-24991925 Arabidopsis lyrata
AL1G55732 5.0kb upstream 5.0kb upstream 5000   false scaffold_1: 24984853-24989852 Arabidopsis lyrata
AL1G55732 5.0kb downstream 5.0kb downstream 7073   true scaffold_1: 24989853-24996925 Arabidopsis lyrata
AL1G55732 5.0kb downstream 5.0kb downstream 5000   false scaffold_1: 24991926-24996925 Arabidopsis lyrata
AL1G55732 10.0kb upstream 10.0kb upstream 12073   true scaffold_1: 24979853-24991925 Arabidopsis lyrata
AL1G55732 10.0kb upstream 10.0kb upstream 10000   false scaffold_1: 24979853-24989852 Arabidopsis lyrata
AL1G55732 10.0kb downstream 10.0kb downstream 12073   true scaffold_1: 24989853-25001925 Arabidopsis lyrata
AL1G55732 10.0kb downstream 10.0kb downstream 10000   false scaffold_1: 24991926-25001925 Arabidopsis lyrata

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122364658 5261 Brassicaceae View MSA
123829988 5264 Brassicales-Malvales View MSA
124349496 5266 SBM View MSA
124250017 5268 Malvidae View MSA
124069751 5270 Rosid View MSA
123749752 5271 Pentapetalae View MSA
122794899 5272 Eudicot View MSA
122047342 5273 Angiosperm View MSA
121310731 5274 Embryophyte View MSA
123348144 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain