Gene : AL1G60040 A. lyrata v2.1

Defline:  (1 of 2) K01412 - mitochondrial-processing peptidase subunit alpha [EC:3.4.24.64] (PMPCA, MAS2) Genomic Order:  4586
Name:  ? AL1G60040 Secondary Identifier:  ? PAC:35931289

Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Alyrata PWY-3781 Arabidopsis lyrata pathologic  
Alyrata PWY-7279 Arabidopsis lyrata pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AL1G60040 0.5kb upstream 0.5kb upstream 3975   true scaffold_1: 27604691-27608665 Arabidopsis lyrata
AL1G60040 0.5kb upstream 0.5kb upstream 500   false scaffold_1: 27608166-27608665 Arabidopsis lyrata
AL1G60040 0.5kb downstream 0.5kb downstream 3975   true scaffold_1: 27604191-27608165 Arabidopsis lyrata
AL1G60040 0.5kb downstream 0.5kb downstream 500   false scaffold_1: 27604191-27604690 Arabidopsis lyrata
AL1G60040 1.0kb upstream 1.0kb upstream 4475   true scaffold_1: 27604691-27609165 Arabidopsis lyrata
AL1G60040 1.0kb upstream 1.0kb upstream 1000   false scaffold_1: 27608166-27609165 Arabidopsis lyrata
AL1G60040 1.0kb downstream 1.0kb downstream 4475   true scaffold_1: 27603691-27608165 Arabidopsis lyrata
AL1G60040 1.0kb downstream 1.0kb downstream 1000   false scaffold_1: 27603691-27604690 Arabidopsis lyrata
AL1G60040 2.0kb upstream 2.0kb upstream 5475   true scaffold_1: 27604691-27610165 Arabidopsis lyrata
AL1G60040 2.0kb upstream 2.0kb upstream 2000   false scaffold_1: 27608166-27610165 Arabidopsis lyrata
AL1G60040 2.0kb downstream 2.0kb downstream 5475   true scaffold_1: 27602691-27608165 Arabidopsis lyrata
AL1G60040 2.0kb downstream 2.0kb downstream 2000   false scaffold_1: 27602691-27604690 Arabidopsis lyrata
AL1G60040 5.0kb upstream 5.0kb upstream 8475   true scaffold_1: 27604691-27613165 Arabidopsis lyrata
AL1G60040 5.0kb upstream 5.0kb upstream 5000   false scaffold_1: 27608166-27613165 Arabidopsis lyrata
AL1G60040 5.0kb downstream 5.0kb downstream 8475   true scaffold_1: 27599691-27608165 Arabidopsis lyrata
AL1G60040 5.0kb downstream 5.0kb downstream 5000   false scaffold_1: 27599691-27604690 Arabidopsis lyrata
AL1G60040 10.0kb upstream 10.0kb upstream 13475   true scaffold_1: 27604691-27618165 Arabidopsis lyrata
AL1G60040 10.0kb upstream 10.0kb upstream 10000   false scaffold_1: 27608166-27618165 Arabidopsis lyrata
AL1G60040 10.0kb downstream 10.0kb downstream 13475   true scaffold_1: 27594691-27608165 Arabidopsis lyrata
AL1G60040 10.0kb downstream 10.0kb downstream 10000   false scaffold_1: 27594691-27604690 Arabidopsis lyrata

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041394 5273 Angiosperm View MSA
122370370 5261 Brassicaceae View MSA
123837486 5264 Brassicales-Malvales View MSA
124346987 5266 SBM View MSA
124244870 5268 Malvidae View MSA
124064083 5270 Rosid View MSA
123738249 5271 Pentapetalae View MSA
122789346 5272 Eudicot View MSA
121350423 5274 Embryophyte View MSA
123425006 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain