Gene : AL1G59320 A. lyrata v2.1

Defline:  (1 of 1) PTHR31403:SF6 - PHOSPHOLIPASE A1-IGAMMA3, CHLOROPLASTIC Genomic Order:  4522
Name:  ? AL1G59320 Secondary Identifier:  ? PAC:35933040

Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Alyrata LIPAS-PWY Arabidopsis lyrata pathologic  
Alyrata LIPASYN-PWY Arabidopsis lyrata pathologic  
Alyrata PWY-6803 Arabidopsis lyrata pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AL1G59320 0.5kb upstream 0.5kb upstream 2221   true scaffold_1: 27114783-27117003 Arabidopsis lyrata
AL1G59320 0.5kb upstream 0.5kb upstream 500   false scaffold_1: 27114783-27115282 Arabidopsis lyrata
AL1G59320 0.5kb downstream 0.5kb downstream 2221   true scaffold_1: 27115283-27117503 Arabidopsis lyrata
AL1G59320 0.5kb downstream 0.5kb downstream 500   false scaffold_1: 27117004-27117503 Arabidopsis lyrata
AL1G59320 1.0kb upstream 1.0kb upstream 2721   true scaffold_1: 27114283-27117003 Arabidopsis lyrata
AL1G59320 1.0kb upstream 1.0kb upstream 1000   false scaffold_1: 27114283-27115282 Arabidopsis lyrata
AL1G59320 1.0kb downstream 1.0kb downstream 2721   true scaffold_1: 27115283-27118003 Arabidopsis lyrata
AL1G59320 1.0kb downstream 1.0kb downstream 1000   false scaffold_1: 27117004-27118003 Arabidopsis lyrata
AL1G59320 2.0kb upstream 2.0kb upstream 3721   true scaffold_1: 27113283-27117003 Arabidopsis lyrata
AL1G59320 2.0kb upstream 2.0kb upstream 2000   false scaffold_1: 27113283-27115282 Arabidopsis lyrata
AL1G59320 2.0kb downstream 2.0kb downstream 3721   true scaffold_1: 27115283-27119003 Arabidopsis lyrata
AL1G59320 2.0kb downstream 2.0kb downstream 2000   false scaffold_1: 27117004-27119003 Arabidopsis lyrata
AL1G59320 5.0kb upstream 5.0kb upstream 6721   true scaffold_1: 27110283-27117003 Arabidopsis lyrata
AL1G59320 5.0kb upstream 5.0kb upstream 5000   false scaffold_1: 27110283-27115282 Arabidopsis lyrata
AL1G59320 5.0kb downstream 5.0kb downstream 6721   true scaffold_1: 27115283-27122003 Arabidopsis lyrata
AL1G59320 5.0kb downstream 5.0kb downstream 5000   false scaffold_1: 27117004-27122003 Arabidopsis lyrata
AL1G59320 10.0kb upstream 10.0kb upstream 11721   true scaffold_1: 27105283-27117003 Arabidopsis lyrata
AL1G59320 10.0kb upstream 10.0kb upstream 10000   false scaffold_1: 27105283-27115282 Arabidopsis lyrata
AL1G59320 10.0kb downstream 10.0kb downstream 11721   true scaffold_1: 27115283-27127003 Arabidopsis lyrata
AL1G59320 10.0kb downstream 10.0kb downstream 10000   false scaffold_1: 27117004-27127003 Arabidopsis lyrata

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122372196 5261 Brassicaceae View MSA
123831765 5264 Brassicales-Malvales View MSA
124341811 5266 SBM View MSA
124244577 5268 Malvidae View MSA
124070138 5270 Rosid View MSA
123750987 5271 Pentapetalae View MSA
122791980 5272 Eudicot View MSA
122045871 5273 Angiosperm View MSA
121350475 5274 Embryophyte View MSA
123428676 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain