Gene : AL1G61640 A. lyrata v2.1

Defline:  (1 of 5) K00026 - malate dehydrogenase (MDH2) Genomic Order:  4732
Name:  ? AL1G61640 Secondary Identifier:  ? PAC:35933829

Sequence Feature Displayer

Ontology Annotation Displayer

7 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Alyrata GLUCONEO-PWY Arabidopsis lyrata pathologic  
Alyrata GLYOXYLATE-BYPASS Arabidopsis lyrata pathologic  
Alyrata PWY-5464 Arabidopsis lyrata pathologic  
Alyrata PWY-561 Arabidopsis lyrata pathologic  
Alyrata PWY-5690 Arabidopsis lyrata pathologic  
Alyrata PWY66-399 Arabidopsis lyrata pathologic  
Alyrata PWY-7115 Arabidopsis lyrata pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AL1G61640 0.5kb upstream 0.5kb upstream 2812   true scaffold_1: 28399321-28402132 Arabidopsis lyrata
AL1G61640 0.5kb upstream 0.5kb upstream 500   false scaffold_1: 28401633-28402132 Arabidopsis lyrata
AL1G61640 0.5kb downstream 0.5kb downstream 2812   true scaffold_1: 28398821-28401632 Arabidopsis lyrata
AL1G61640 0.5kb downstream 0.5kb downstream 500   false scaffold_1: 28398821-28399320 Arabidopsis lyrata
AL1G61640 1.0kb upstream 1.0kb upstream 3312   true scaffold_1: 28399321-28402632 Arabidopsis lyrata
AL1G61640 1.0kb upstream 1.0kb upstream 1000   false scaffold_1: 28401633-28402632 Arabidopsis lyrata
AL1G61640 1.0kb downstream 1.0kb downstream 3312   true scaffold_1: 28398321-28401632 Arabidopsis lyrata
AL1G61640 1.0kb downstream 1.0kb downstream 1000   false scaffold_1: 28398321-28399320 Arabidopsis lyrata
AL1G61640 2.0kb upstream 2.0kb upstream 4312   true scaffold_1: 28399321-28403632 Arabidopsis lyrata
AL1G61640 2.0kb upstream 2.0kb upstream 2000   false scaffold_1: 28401633-28403632 Arabidopsis lyrata
AL1G61640 2.0kb downstream 2.0kb downstream 4312   true scaffold_1: 28397321-28401632 Arabidopsis lyrata
AL1G61640 2.0kb downstream 2.0kb downstream 2000   false scaffold_1: 28397321-28399320 Arabidopsis lyrata
AL1G61640 5.0kb upstream 5.0kb upstream 7312   true scaffold_1: 28399321-28406632 Arabidopsis lyrata
AL1G61640 5.0kb upstream 5.0kb upstream 5000   false scaffold_1: 28401633-28406632 Arabidopsis lyrata
AL1G61640 5.0kb downstream 5.0kb downstream 7312   true scaffold_1: 28394321-28401632 Arabidopsis lyrata
AL1G61640 5.0kb downstream 5.0kb downstream 5000   false scaffold_1: 28394321-28399320 Arabidopsis lyrata
AL1G61640 10.0kb upstream 10.0kb upstream 12312   true scaffold_1: 28399321-28411632 Arabidopsis lyrata
AL1G61640 10.0kb upstream 10.0kb upstream 10000   false scaffold_1: 28401633-28411632 Arabidopsis lyrata
AL1G61640 10.0kb downstream 10.0kb downstream 12312   true scaffold_1: 28389321-28401632 Arabidopsis lyrata
AL1G61640 10.0kb downstream 10.0kb downstream 10000   false scaffold_1: 28389321-28399320 Arabidopsis lyrata

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122375905 5261 Brassicaceae View MSA
123840380 5264 Brassicales-Malvales View MSA
124342947 5266 SBM View MSA
124249329 5268 Malvidae View MSA
124072115 5270 Rosid View MSA
123744980 5271 Pentapetalae View MSA
122794194 5272 Eudicot View MSA
122042635 5273 Angiosperm View MSA
121345492 5274 Embryophyte View MSA
123423974 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain