Gene : AL1G61080 A. lyrata v2.1

Defline:  (1 of 1) K18368 - caffeoylshikimate esterase (CSE) Genomic Order:  4680
Name:  ? AL1G61080 Secondary Identifier:  ? PAC:35935465

Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Alyrata PWY-7420 Arabidopsis lyrata pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AL1G61080 0.5kb upstream 0.5kb upstream 1965   true scaffold_1: 28104025-28105989 Arabidopsis lyrata
AL1G61080 0.5kb upstream 0.5kb upstream 500   false scaffold_1: 28104025-28104524 Arabidopsis lyrata
AL1G61080 0.5kb downstream 0.5kb downstream 1965   true scaffold_1: 28104525-28106489 Arabidopsis lyrata
AL1G61080 0.5kb downstream 0.5kb downstream 500   false scaffold_1: 28105990-28106489 Arabidopsis lyrata
AL1G61080 1.0kb upstream 1.0kb upstream 2465   true scaffold_1: 28103525-28105989 Arabidopsis lyrata
AL1G61080 1.0kb upstream 1.0kb upstream 1000   false scaffold_1: 28103525-28104524 Arabidopsis lyrata
AL1G61080 1.0kb downstream 1.0kb downstream 2465   true scaffold_1: 28104525-28106989 Arabidopsis lyrata
AL1G61080 1.0kb downstream 1.0kb downstream 1000   false scaffold_1: 28105990-28106989 Arabidopsis lyrata
AL1G61080 2.0kb upstream 2.0kb upstream 3465   true scaffold_1: 28102525-28105989 Arabidopsis lyrata
AL1G61080 2.0kb upstream 2.0kb upstream 2000   false scaffold_1: 28102525-28104524 Arabidopsis lyrata
AL1G61080 2.0kb downstream 2.0kb downstream 3465   true scaffold_1: 28104525-28107989 Arabidopsis lyrata
AL1G61080 2.0kb downstream 2.0kb downstream 2000   false scaffold_1: 28105990-28107989 Arabidopsis lyrata
AL1G61080 5.0kb upstream 5.0kb upstream 6465   true scaffold_1: 28099525-28105989 Arabidopsis lyrata
AL1G61080 5.0kb upstream 5.0kb upstream 5000   false scaffold_1: 28099525-28104524 Arabidopsis lyrata
AL1G61080 5.0kb downstream 5.0kb downstream 6465   true scaffold_1: 28104525-28110989 Arabidopsis lyrata
AL1G61080 5.0kb downstream 5.0kb downstream 5000   false scaffold_1: 28105990-28110989 Arabidopsis lyrata
AL1G61080 10.0kb upstream 10.0kb upstream 11465   true scaffold_1: 28094525-28105989 Arabidopsis lyrata
AL1G61080 10.0kb upstream 10.0kb upstream 10000   false scaffold_1: 28094525-28104524 Arabidopsis lyrata
AL1G61080 10.0kb downstream 10.0kb downstream 11465   true scaffold_1: 28104525-28115989 Arabidopsis lyrata
AL1G61080 10.0kb downstream 10.0kb downstream 10000   false scaffold_1: 28105990-28115989 Arabidopsis lyrata

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122360167 5261 Brassicaceae View MSA
123836186 5264 Brassicales-Malvales View MSA
124341829 5266 SBM View MSA
124249533 5268 Malvidae View MSA
124066085 5270 Rosid View MSA
123751749 5271 Pentapetalae View MSA
122792036 5272 Eudicot View MSA
122045560 5273 Angiosperm View MSA
121350662 5274 Embryophyte View MSA
123428617 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain