Gene : AL1G62980 A. lyrata v2.1

Defline:  (1 of 2) K03016 - DNA-directed RNA polymerases I, II, and III subunit RPABC3 (RPB8, POLR2H) Genomic Order:  4854
Name:  ? AL1G62980 Secondary Identifier:  ? PAC:35930239

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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AL1G62980 0.5kb upstream 0.5kb upstream 1975   true scaffold_1: 29048936-29050910 Arabidopsis lyrata
AL1G62980 0.5kb upstream 0.5kb upstream 500   false scaffold_1: 29048936-29049435 Arabidopsis lyrata
AL1G62980 0.5kb downstream 0.5kb downstream 1975   true scaffold_1: 29049436-29051410 Arabidopsis lyrata
AL1G62980 0.5kb downstream 0.5kb downstream 500   false scaffold_1: 29050911-29051410 Arabidopsis lyrata
AL1G62980 1.0kb upstream 1.0kb upstream 2475   true scaffold_1: 29048436-29050910 Arabidopsis lyrata
AL1G62980 1.0kb upstream 1.0kb upstream 1000   false scaffold_1: 29048436-29049435 Arabidopsis lyrata
AL1G62980 1.0kb downstream 1.0kb downstream 2475   true scaffold_1: 29049436-29051910 Arabidopsis lyrata
AL1G62980 1.0kb downstream 1.0kb downstream 1000   false scaffold_1: 29050911-29051910 Arabidopsis lyrata
AL1G62980 2.0kb upstream 2.0kb upstream 3475   true scaffold_1: 29047436-29050910 Arabidopsis lyrata
AL1G62980 2.0kb upstream 2.0kb upstream 2000   false scaffold_1: 29047436-29049435 Arabidopsis lyrata
AL1G62980 2.0kb downstream 2.0kb downstream 3475   true scaffold_1: 29049436-29052910 Arabidopsis lyrata
AL1G62980 2.0kb downstream 2.0kb downstream 2000   false scaffold_1: 29050911-29052910 Arabidopsis lyrata
AL1G62980 5.0kb upstream 5.0kb upstream 6475   true scaffold_1: 29044436-29050910 Arabidopsis lyrata
AL1G62980 5.0kb upstream 5.0kb upstream 5000   false scaffold_1: 29044436-29049435 Arabidopsis lyrata
AL1G62980 5.0kb downstream 5.0kb downstream 6475   true scaffold_1: 29049436-29055910 Arabidopsis lyrata
AL1G62980 5.0kb downstream 5.0kb downstream 5000   false scaffold_1: 29050911-29055910 Arabidopsis lyrata
AL1G62980 10.0kb upstream 10.0kb upstream 11475   true scaffold_1: 29039436-29050910 Arabidopsis lyrata
AL1G62980 10.0kb upstream 10.0kb upstream 10000   false scaffold_1: 29039436-29049435 Arabidopsis lyrata
AL1G62980 10.0kb downstream 10.0kb downstream 11475   true scaffold_1: 29049436-29060910 Arabidopsis lyrata
AL1G62980 10.0kb downstream 10.0kb downstream 10000   false scaffold_1: 29050911-29060910 Arabidopsis lyrata

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122332026 5261 Brassicaceae View MSA
123773144 5264 Brassicales-Malvales View MSA
124346830 5266 SBM View MSA
124242683 5268 Malvidae View MSA
124064544 5270 Rosid View MSA
123742765 5271 Pentapetalae View MSA
122785974 5272 Eudicot View MSA
122051264 5273 Angiosperm View MSA
121346486 5274 Embryophyte View MSA
123424696 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain