Gene : AL2G12690 A. lyrata v2.1

Defline:  (1 of 3) K14270 - aminotransferase (ACS10_12) Genomic Order:  246
Name:  ? AL2G12690 Secondary Identifier:  ? PAC:35945354

Sequence Feature Displayer

Ontology Annotation Displayer

6 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Alyrata ASPARTATE-DEG1-PWY Arabidopsis lyrata pathologic  
Alyrata ASPARTATESYN-PWY Arabidopsis lyrata pathologic  
Alyrata PWY-3001 Arabidopsis lyrata pathologic  
Alyrata PWY-7115 Arabidopsis lyrata pathologic  
Alyrata PWY-7117 Arabidopsis lyrata pathologic  
Alyrata THRESYN-PWY Arabidopsis lyrata pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AL2G12690 0.5kb upstream 0.5kb upstream 2706   true scaffold_2: 1340648-1343353 Arabidopsis lyrata
AL2G12690 0.5kb upstream 0.5kb upstream 500   false scaffold_2: 1340648-1341147 Arabidopsis lyrata
AL2G12690 0.5kb downstream 0.5kb downstream 2706   true scaffold_2: 1341148-1343853 Arabidopsis lyrata
AL2G12690 0.5kb downstream 0.5kb downstream 500   false scaffold_2: 1343354-1343853 Arabidopsis lyrata
AL2G12690 1.0kb upstream 1.0kb upstream 3206   true scaffold_2: 1340148-1343353 Arabidopsis lyrata
AL2G12690 1.0kb upstream 1.0kb upstream 1000   false scaffold_2: 1340148-1341147 Arabidopsis lyrata
AL2G12690 1.0kb downstream 1.0kb downstream 3206   true scaffold_2: 1341148-1344353 Arabidopsis lyrata
AL2G12690 1.0kb downstream 1.0kb downstream 1000   false scaffold_2: 1343354-1344353 Arabidopsis lyrata
AL2G12690 2.0kb upstream 2.0kb upstream 4206   true scaffold_2: 1339148-1343353 Arabidopsis lyrata
AL2G12690 2.0kb upstream 2.0kb upstream 2000   false scaffold_2: 1339148-1341147 Arabidopsis lyrata
AL2G12690 2.0kb downstream 2.0kb downstream 4206   true scaffold_2: 1341148-1345353 Arabidopsis lyrata
AL2G12690 2.0kb downstream 2.0kb downstream 2000   false scaffold_2: 1343354-1345353 Arabidopsis lyrata
AL2G12690 5.0kb upstream 5.0kb upstream 7206   true scaffold_2: 1336148-1343353 Arabidopsis lyrata
AL2G12690 5.0kb upstream 5.0kb upstream 5000   false scaffold_2: 1336148-1341147 Arabidopsis lyrata
AL2G12690 5.0kb downstream 5.0kb downstream 7206   true scaffold_2: 1341148-1348353 Arabidopsis lyrata
AL2G12690 5.0kb downstream 5.0kb downstream 5000   false scaffold_2: 1343354-1348353 Arabidopsis lyrata
AL2G12690 10.0kb upstream 10.0kb upstream 12206   true scaffold_2: 1331148-1343353 Arabidopsis lyrata
AL2G12690 10.0kb upstream 10.0kb upstream 10000   false scaffold_2: 1331148-1341147 Arabidopsis lyrata
AL2G12690 10.0kb downstream 10.0kb downstream 12206   true scaffold_2: 1341148-1353353 Arabidopsis lyrata
AL2G12690 10.0kb downstream 10.0kb downstream 10000   false scaffold_2: 1343354-1353353 Arabidopsis lyrata

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122368439 5261 Brassicaceae View MSA
123837243 5264 Brassicales-Malvales View MSA
124346095 5266 SBM View MSA
124240842 5268 Malvidae View MSA
124060973 5270 Rosid View MSA
123749397 5271 Pentapetalae View MSA
122792167 5272 Eudicot View MSA
122042730 5273 Angiosperm View MSA
121351183 5274 Embryophyte View MSA
123428176 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain