Gene : AL2G11560 A. lyrata v2.1

Defline:  (1 of 1) PTHR21726:SF38 - PROTEIN TRM32 Genomic Order:  143
Name:  ? AL2G11560 Secondary Identifier:  ? PAC:35946978

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AL2G11560 0.5kb upstream 0.5kb upstream 3940   true scaffold_2: 765423-769362 Arabidopsis lyrata
AL2G11560 0.5kb upstream 0.5kb upstream 500   false scaffold_2: 765423-765922 Arabidopsis lyrata
AL2G11560 0.5kb downstream 0.5kb downstream 3940   true scaffold_2: 765923-769862 Arabidopsis lyrata
AL2G11560 0.5kb downstream 0.5kb downstream 500   false scaffold_2: 769363-769862 Arabidopsis lyrata
AL2G11560 1.0kb upstream 1.0kb upstream 4440   true scaffold_2: 764923-769362 Arabidopsis lyrata
AL2G11560 1.0kb upstream 1.0kb upstream 1000   false scaffold_2: 764923-765922 Arabidopsis lyrata
AL2G11560 1.0kb downstream 1.0kb downstream 4440   true scaffold_2: 765923-770362 Arabidopsis lyrata
AL2G11560 1.0kb downstream 1.0kb downstream 1000   false scaffold_2: 769363-770362 Arabidopsis lyrata
AL2G11560 2.0kb upstream 2.0kb upstream 5440   true scaffold_2: 763923-769362 Arabidopsis lyrata
AL2G11560 2.0kb upstream 2.0kb upstream 2000   false scaffold_2: 763923-765922 Arabidopsis lyrata
AL2G11560 2.0kb downstream 2.0kb downstream 5440   true scaffold_2: 765923-771362 Arabidopsis lyrata
AL2G11560 2.0kb downstream 2.0kb downstream 2000   false scaffold_2: 769363-771362 Arabidopsis lyrata
AL2G11560 5.0kb upstream 5.0kb upstream 8440   true scaffold_2: 760923-769362 Arabidopsis lyrata
AL2G11560 5.0kb upstream 5.0kb upstream 5000   false scaffold_2: 760923-765922 Arabidopsis lyrata
AL2G11560 5.0kb downstream 5.0kb downstream 8440   true scaffold_2: 765923-774362 Arabidopsis lyrata
AL2G11560 5.0kb downstream 5.0kb downstream 5000   false scaffold_2: 769363-774362 Arabidopsis lyrata
AL2G11560 10.0kb upstream 10.0kb upstream 13440   true scaffold_2: 755923-769362 Arabidopsis lyrata
AL2G11560 10.0kb upstream 10.0kb upstream 10000   false scaffold_2: 755923-765922 Arabidopsis lyrata
AL2G11560 10.0kb downstream 10.0kb downstream 13440   true scaffold_2: 765923-779362 Arabidopsis lyrata
AL2G11560 10.0kb downstream 10.0kb downstream 10000   false scaffold_2: 769363-779362 Arabidopsis lyrata

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122374780 5261 Brassicaceae View MSA
123837222 5264 Brassicales-Malvales View MSA
124322264 5266 SBM View MSA
124250256 5268 Malvidae View MSA
124071904 5270 Rosid View MSA
123753280 5271 Pentapetalae View MSA
122795143 5272 Eudicot View MSA
122044494 5273 Angiosperm View MSA
121350314 5274 Embryophyte View MSA
123381675 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain