Gene : AL2G10390 A. lyrata v2.1

Defline:  (1 of 1) PTHR10666:SF134 - PHOSPHATIDYLINOSITOL 4-KINASE GAMMA 2 Genomic Order:  37
Name:  ? AL2G10390 Secondary Identifier:  ? PAC:35945540

Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Alyrata PWY-6351 Arabidopsis lyrata pathologic  
Alyrata PWY-6352 Arabidopsis lyrata pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AL2G10390 0.5kb upstream 0.5kb upstream 2801   true scaffold_2: 206482-209282 Arabidopsis lyrata
AL2G10390 0.5kb upstream 0.5kb upstream 500   false scaffold_2: 206482-206981 Arabidopsis lyrata
AL2G10390 0.5kb downstream 0.5kb downstream 2801   true scaffold_2: 206982-209782 Arabidopsis lyrata
AL2G10390 0.5kb downstream 0.5kb downstream 500   false scaffold_2: 209283-209782 Arabidopsis lyrata
AL2G10390 1.0kb upstream 1.0kb upstream 3301   true scaffold_2: 205982-209282 Arabidopsis lyrata
AL2G10390 1.0kb upstream 1.0kb upstream 1000   false scaffold_2: 205982-206981 Arabidopsis lyrata
AL2G10390 1.0kb downstream 1.0kb downstream 3301   true scaffold_2: 206982-210282 Arabidopsis lyrata
AL2G10390 1.0kb downstream 1.0kb downstream 1000   false scaffold_2: 209283-210282 Arabidopsis lyrata
AL2G10390 2.0kb upstream 2.0kb upstream 4301   true scaffold_2: 204982-209282 Arabidopsis lyrata
AL2G10390 2.0kb upstream 2.0kb upstream 2000   false scaffold_2: 204982-206981 Arabidopsis lyrata
AL2G10390 2.0kb downstream 2.0kb downstream 4301   true scaffold_2: 206982-211282 Arabidopsis lyrata
AL2G10390 2.0kb downstream 2.0kb downstream 2000   false scaffold_2: 209283-211282 Arabidopsis lyrata
AL2G10390 5.0kb upstream 5.0kb upstream 7301   true scaffold_2: 201982-209282 Arabidopsis lyrata
AL2G10390 5.0kb upstream 5.0kb upstream 5000   false scaffold_2: 201982-206981 Arabidopsis lyrata
AL2G10390 5.0kb downstream 5.0kb downstream 7301   true scaffold_2: 206982-214282 Arabidopsis lyrata
AL2G10390 5.0kb downstream 5.0kb downstream 5000   false scaffold_2: 209283-214282 Arabidopsis lyrata
AL2G10390 10.0kb upstream 10.0kb upstream 12301   true scaffold_2: 196982-209282 Arabidopsis lyrata
AL2G10390 10.0kb upstream 10.0kb upstream 10000   false scaffold_2: 196982-206981 Arabidopsis lyrata
AL2G10390 10.0kb downstream 10.0kb downstream 12301   true scaffold_2: 206982-219282 Arabidopsis lyrata
AL2G10390 10.0kb downstream 10.0kb downstream 10000   false scaffold_2: 209283-219282 Arabidopsis lyrata

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122362489 5261 Brassicaceae View MSA
123840083 5264 Brassicales-Malvales View MSA
124348699 5266 SBM View MSA
124242483 5268 Malvidae View MSA
124070925 5270 Rosid View MSA
123742266 5271 Pentapetalae View MSA
122789753 5272 Eudicot View MSA
122042633 5273 Angiosperm View MSA
121350148 5274 Embryophyte View MSA
123381595 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain