Gene : AL2G13030 A. lyrata v2.1

Defline:  (1 of 1) PTHR31080:SF8 - F23N19.12 Genomic Order:  273
Name:  ? AL2G13030 Secondary Identifier:  ? PAC:35945899

Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Alyrata PWY-1081 Arabidopsis lyrata pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AL2G13030 0.5kb upstream 0.5kb upstream 1681   true scaffold_2: 1501605-1503285 Arabidopsis lyrata
AL2G13030 0.5kb upstream 0.5kb upstream 500   false scaffold_2: 1501605-1502104 Arabidopsis lyrata
AL2G13030 0.5kb downstream 0.5kb downstream 1681   true scaffold_2: 1502105-1503785 Arabidopsis lyrata
AL2G13030 0.5kb downstream 0.5kb downstream 500   false scaffold_2: 1503286-1503785 Arabidopsis lyrata
AL2G13030 1.0kb upstream 1.0kb upstream 2181   true scaffold_2: 1501105-1503285 Arabidopsis lyrata
AL2G13030 1.0kb upstream 1.0kb upstream 1000   false scaffold_2: 1501105-1502104 Arabidopsis lyrata
AL2G13030 1.0kb downstream 1.0kb downstream 2181   true scaffold_2: 1502105-1504285 Arabidopsis lyrata
AL2G13030 1.0kb downstream 1.0kb downstream 1000   false scaffold_2: 1503286-1504285 Arabidopsis lyrata
AL2G13030 2.0kb upstream 2.0kb upstream 3181   true scaffold_2: 1500105-1503285 Arabidopsis lyrata
AL2G13030 2.0kb upstream 2.0kb upstream 2000   false scaffold_2: 1500105-1502104 Arabidopsis lyrata
AL2G13030 2.0kb downstream 2.0kb downstream 3181   true scaffold_2: 1502105-1505285 Arabidopsis lyrata
AL2G13030 2.0kb downstream 2.0kb downstream 2000   false scaffold_2: 1503286-1505285 Arabidopsis lyrata
AL2G13030 5.0kb upstream 5.0kb upstream 6181   true scaffold_2: 1497105-1503285 Arabidopsis lyrata
AL2G13030 5.0kb upstream 5.0kb upstream 5000   false scaffold_2: 1497105-1502104 Arabidopsis lyrata
AL2G13030 5.0kb downstream 5.0kb downstream 6181   true scaffold_2: 1502105-1508285 Arabidopsis lyrata
AL2G13030 5.0kb downstream 5.0kb downstream 5000   false scaffold_2: 1503286-1508285 Arabidopsis lyrata
AL2G13030 10.0kb upstream 10.0kb upstream 11181   true scaffold_2: 1492105-1503285 Arabidopsis lyrata
AL2G13030 10.0kb upstream 10.0kb upstream 10000   false scaffold_2: 1492105-1502104 Arabidopsis lyrata
AL2G13030 10.0kb downstream 10.0kb downstream 11181   true scaffold_2: 1502105-1513285 Arabidopsis lyrata
AL2G13030 10.0kb downstream 10.0kb downstream 10000   false scaffold_2: 1503286-1513285 Arabidopsis lyrata

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122343319 5261 Brassicaceae View MSA
123783558 5264 Brassicales-Malvales View MSA
124281783 5266 SBM View MSA
124251133 5268 Malvidae View MSA
124072666 5270 Rosid View MSA
123751304 5271 Pentapetalae View MSA
122797599 5272 Eudicot View MSA
122046899 5273 Angiosperm View MSA
121310670 5274 Embryophyte View MSA
123348096 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain