Gene : AL2G16200 A. lyrata v2.1

Defline:  (1 of 1) K00914 - phosphatidylinositol 3-kinase (PIK3C3, VPS34) Genomic Order:  560
Name:  ? AL2G16200 Secondary Identifier:  ? PAC:35945189

Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Alyrata PWY-6352 Arabidopsis lyrata pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AL2G16200 0.5kb upstream 0.5kb upstream 10845   true scaffold_2: 3145832-3156676 Arabidopsis lyrata
AL2G16200 0.5kb upstream 0.5kb upstream 500   false scaffold_2: 3145832-3146331 Arabidopsis lyrata
AL2G16200 0.5kb downstream 0.5kb downstream 10845   true scaffold_2: 3146332-3157176 Arabidopsis lyrata
AL2G16200 0.5kb downstream 0.5kb downstream 500   false scaffold_2: 3156677-3157176 Arabidopsis lyrata
AL2G16200 1.0kb upstream 1.0kb upstream 11345   true scaffold_2: 3145332-3156676 Arabidopsis lyrata
AL2G16200 1.0kb upstream 1.0kb upstream 1000   false scaffold_2: 3145332-3146331 Arabidopsis lyrata
AL2G16200 1.0kb downstream 1.0kb downstream 11345   true scaffold_2: 3146332-3157676 Arabidopsis lyrata
AL2G16200 1.0kb downstream 1.0kb downstream 1000   false scaffold_2: 3156677-3157676 Arabidopsis lyrata
AL2G16200 2.0kb upstream 2.0kb upstream 12345   true scaffold_2: 3144332-3156676 Arabidopsis lyrata
AL2G16200 2.0kb upstream 2.0kb upstream 2000   false scaffold_2: 3144332-3146331 Arabidopsis lyrata
AL2G16200 2.0kb downstream 2.0kb downstream 12345   true scaffold_2: 3146332-3158676 Arabidopsis lyrata
AL2G16200 2.0kb downstream 2.0kb downstream 2000   false scaffold_2: 3156677-3158676 Arabidopsis lyrata
AL2G16200 5.0kb upstream 5.0kb upstream 15345   true scaffold_2: 3141332-3156676 Arabidopsis lyrata
AL2G16200 5.0kb upstream 5.0kb upstream 5000   false scaffold_2: 3141332-3146331 Arabidopsis lyrata
AL2G16200 5.0kb downstream 5.0kb downstream 15345   true scaffold_2: 3146332-3161676 Arabidopsis lyrata
AL2G16200 5.0kb downstream 5.0kb downstream 5000   false scaffold_2: 3156677-3161676 Arabidopsis lyrata
AL2G16200 10.0kb upstream 10.0kb upstream 20345   true scaffold_2: 3136332-3156676 Arabidopsis lyrata
AL2G16200 10.0kb upstream 10.0kb upstream 10000   false scaffold_2: 3136332-3146331 Arabidopsis lyrata
AL2G16200 10.0kb downstream 10.0kb downstream 20345   true scaffold_2: 3146332-3166676 Arabidopsis lyrata
AL2G16200 10.0kb downstream 10.0kb downstream 10000   false scaffold_2: 3156677-3166676 Arabidopsis lyrata

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122364912 5261 Brassicaceae View MSA
123828018 5264 Brassicales-Malvales View MSA
124343586 5266 SBM View MSA
124242374 5268 Malvidae View MSA
124062469 5270 Rosid View MSA
123739232 5271 Pentapetalae View MSA
122788961 5272 Eudicot View MSA
122044904 5273 Angiosperm View MSA
121346569 5274 Embryophyte View MSA
123428471 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain