Gene : AL2G21314 A. lyrata v2.1

Defline:  (1 of 3) K02705 - photosystem II CP43 chlorophyll apoprotein (psbC) Genomic Order:  971
Name:  ? AL2G21314 Secondary Identifier:  ? PAC:35946385

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AL2G21314 0.5kb upstream 0.5kb upstream 1922   true scaffold_2: 9135259-9137180 Arabidopsis lyrata
AL2G21314 0.5kb upstream 0.5kb upstream 500   false scaffold_2: 9135259-9135758 Arabidopsis lyrata
AL2G21314 0.5kb downstream 0.5kb downstream 1922   true scaffold_2: 9135759-9137680 Arabidopsis lyrata
AL2G21314 0.5kb downstream 0.5kb downstream 500   false scaffold_2: 9137181-9137680 Arabidopsis lyrata
AL2G21314 1.0kb upstream 1.0kb upstream 2422   true scaffold_2: 9134759-9137180 Arabidopsis lyrata
AL2G21314 1.0kb upstream 1.0kb upstream 1000   false scaffold_2: 9134759-9135758 Arabidopsis lyrata
AL2G21314 1.0kb downstream 1.0kb downstream 2422   true scaffold_2: 9135759-9138180 Arabidopsis lyrata
AL2G21314 1.0kb downstream 1.0kb downstream 1000   false scaffold_2: 9137181-9138180 Arabidopsis lyrata
AL2G21314 2.0kb upstream 2.0kb upstream 3422   true scaffold_2: 9133759-9137180 Arabidopsis lyrata
AL2G21314 2.0kb upstream 2.0kb upstream 2000   false scaffold_2: 9133759-9135758 Arabidopsis lyrata
AL2G21314 2.0kb downstream 2.0kb downstream 3422   true scaffold_2: 9135759-9139180 Arabidopsis lyrata
AL2G21314 2.0kb downstream 2.0kb downstream 2000   false scaffold_2: 9137181-9139180 Arabidopsis lyrata
AL2G21314 5.0kb upstream 5.0kb upstream 6422   true scaffold_2: 9130759-9137180 Arabidopsis lyrata
AL2G21314 5.0kb upstream 5.0kb upstream 5000   false scaffold_2: 9130759-9135758 Arabidopsis lyrata
AL2G21314 5.0kb downstream 5.0kb downstream 6422   true scaffold_2: 9135759-9142180 Arabidopsis lyrata
AL2G21314 5.0kb downstream 5.0kb downstream 5000   false scaffold_2: 9137181-9142180 Arabidopsis lyrata
AL2G21314 10.0kb upstream 10.0kb upstream 11422   true scaffold_2: 9125759-9137180 Arabidopsis lyrata
AL2G21314 10.0kb upstream 10.0kb upstream 10000   false scaffold_2: 9125759-9135758 Arabidopsis lyrata
AL2G21314 10.0kb downstream 10.0kb downstream 11422   true scaffold_2: 9135759-9147180 Arabidopsis lyrata
AL2G21314 10.0kb downstream 10.0kb downstream 10000   false scaffold_2: 9137181-9147180 Arabidopsis lyrata

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122331953 5261 Brassicaceae View MSA
123828729 5264 Brassicales-Malvales View MSA
124321552 5266 SBM View MSA
124248141 5268 Malvidae View MSA
124038128 5270 Rosid View MSA
123751197 5271 Pentapetalae View MSA
122773946 5272 Eudicot View MSA
122051576 5273 Angiosperm View MSA
123428978 5275 Viridiplantae View MSA
121350250 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain