Gene : AL2G21312 A. lyrata v2.1
Defline:  (1 of 2) K02706 - photosystem II P680 reaction center D2 protein (psbD) Genomic Order:  970
Name:  ? AL2G21312 Secondary Identifier:  ? PAC:35945459
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Alyrata PHOTOALL-PWY Arabidopsis lyrata pathologic  
Alyrata PWY-101 Arabidopsis lyrata pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

3 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AL2G21312 0.5kb upstream 0.5kb upstream 1559   true scaffold_2: 9134250-9135808 Arabidopsis lyrata
AL2G21312 0.5kb upstream 0.5kb upstream 500   false scaffold_2: 9134250-9134749 Arabidopsis lyrata
AL2G21312 0.5kb downstream 0.5kb downstream 1559   true scaffold_2: 9134750-9136308 Arabidopsis lyrata
AL2G21312 0.5kb downstream 0.5kb downstream 500   false scaffold_2: 9135809-9136308 Arabidopsis lyrata
AL2G21312 1.0kb upstream 1.0kb upstream 2059   true scaffold_2: 9133750-9135808 Arabidopsis lyrata
AL2G21312 1.0kb upstream 1.0kb upstream 1000   false scaffold_2: 9133750-9134749 Arabidopsis lyrata
AL2G21312 1.0kb downstream 1.0kb downstream 2059   true scaffold_2: 9134750-9136808 Arabidopsis lyrata
AL2G21312 1.0kb downstream 1.0kb downstream 1000   false scaffold_2: 9135809-9136808 Arabidopsis lyrata
AL2G21312 2.0kb upstream 2.0kb upstream 3059   true scaffold_2: 9132750-9135808 Arabidopsis lyrata
AL2G21312 2.0kb upstream 2.0kb upstream 2000   false scaffold_2: 9132750-9134749 Arabidopsis lyrata
AL2G21312 2.0kb downstream 2.0kb downstream 3059   true scaffold_2: 9134750-9137808 Arabidopsis lyrata
AL2G21312 2.0kb downstream 2.0kb downstream 2000   false scaffold_2: 9135809-9137808 Arabidopsis lyrata
AL2G21312 5.0kb upstream 5.0kb upstream 6059   true scaffold_2: 9129750-9135808 Arabidopsis lyrata
AL2G21312 5.0kb upstream 5.0kb upstream 5000   false scaffold_2: 9129750-9134749 Arabidopsis lyrata
AL2G21312 5.0kb downstream 5.0kb downstream 6059   true scaffold_2: 9134750-9140808 Arabidopsis lyrata
AL2G21312 5.0kb downstream 5.0kb downstream 5000   false scaffold_2: 9135809-9140808 Arabidopsis lyrata
AL2G21312 10.0kb upstream 10.0kb upstream 11059   true scaffold_2: 9124750-9135808 Arabidopsis lyrata
AL2G21312 10.0kb upstream 10.0kb upstream 10000   false scaffold_2: 9124750-9134749 Arabidopsis lyrata
AL2G21312 10.0kb downstream 10.0kb downstream 11059   true scaffold_2: 9134750-9145808 Arabidopsis lyrata
AL2G21312 10.0kb downstream 10.0kb downstream 10000   false scaffold_2: 9135809-9145808 Arabidopsis lyrata

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122376547 5261 Brassicaceae View MSA
123841499 5264 Brassicales-Malvales View MSA
124322948 5266 SBM View MSA
124254176 5268 Malvidae View MSA
124074858 5270 Rosid View MSA
123753555 5271 Pentapetalae View MSA
122797414 5272 Eudicot View MSA
122047558 5273 Angiosperm View MSA
121350331 5274 Embryophyte View MSA
123381681 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain