Gene : AL2G20600 A. lyrata v2.1

Defline:  (1 of 2) K02635 - cytochrome b6 (petB) Genomic Order:  919
Name:  ? AL2G20600 Secondary Identifier:  ? PAC:35947268

Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Alyrata PHOTOALL-PWY Arabidopsis lyrata pathologic  
Alyrata PWY-101 Arabidopsis lyrata pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AL2G20600 0.5kb upstream 0.5kb upstream 1895   true scaffold_2: 8759777-8761671 Arabidopsis lyrata
AL2G20600 0.5kb upstream 0.5kb upstream 500   false scaffold_2: 8761172-8761671 Arabidopsis lyrata
AL2G20600 0.5kb downstream 0.5kb downstream 1895   true scaffold_2: 8759277-8761171 Arabidopsis lyrata
AL2G20600 0.5kb downstream 0.5kb downstream 500   false scaffold_2: 8759277-8759776 Arabidopsis lyrata
AL2G20600 1.0kb upstream 1.0kb upstream 2395   true scaffold_2: 8759777-8762171 Arabidopsis lyrata
AL2G20600 1.0kb upstream 1.0kb upstream 1000   false scaffold_2: 8761172-8762171 Arabidopsis lyrata
AL2G20600 1.0kb downstream 1.0kb downstream 2395   true scaffold_2: 8758777-8761171 Arabidopsis lyrata
AL2G20600 1.0kb downstream 1.0kb downstream 1000   false scaffold_2: 8758777-8759776 Arabidopsis lyrata
AL2G20600 2.0kb upstream 2.0kb upstream 3395   true scaffold_2: 8759777-8763171 Arabidopsis lyrata
AL2G20600 2.0kb upstream 2.0kb upstream 2000   false scaffold_2: 8761172-8763171 Arabidopsis lyrata
AL2G20600 2.0kb downstream 2.0kb downstream 3395   true scaffold_2: 8757777-8761171 Arabidopsis lyrata
AL2G20600 2.0kb downstream 2.0kb downstream 2000   false scaffold_2: 8757777-8759776 Arabidopsis lyrata
AL2G20600 5.0kb upstream 5.0kb upstream 6395   true scaffold_2: 8759777-8766171 Arabidopsis lyrata
AL2G20600 5.0kb upstream 5.0kb upstream 5000   false scaffold_2: 8761172-8766171 Arabidopsis lyrata
AL2G20600 5.0kb downstream 5.0kb downstream 6395   true scaffold_2: 8754777-8761171 Arabidopsis lyrata
AL2G20600 5.0kb downstream 5.0kb downstream 5000   false scaffold_2: 8754777-8759776 Arabidopsis lyrata
AL2G20600 10.0kb upstream 10.0kb upstream 11395   true scaffold_2: 8759777-8771171 Arabidopsis lyrata
AL2G20600 10.0kb upstream 10.0kb upstream 10000   false scaffold_2: 8761172-8771171 Arabidopsis lyrata
AL2G20600 10.0kb downstream 10.0kb downstream 11395   true scaffold_2: 8749777-8761171 Arabidopsis lyrata
AL2G20600 10.0kb downstream 10.0kb downstream 10000   false scaffold_2: 8749777-8759776 Arabidopsis lyrata

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122338523 5261 Brassicaceae View MSA
123841093 5264 Brassicales-Malvales View MSA
124322841 5266 SBM View MSA
124254317 5268 Malvidae View MSA
124051319 5270 Rosid View MSA
123751133 5271 Pentapetalae View MSA
122795753 5272 Eudicot View MSA
122050945 5273 Angiosperm View MSA
123428978 5275 Viridiplantae View MSA
121350678 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain