Gene : AL2G24890 A. lyrata v2.1

Defline:  (1 of 1) PTHR10459:SF38 - DNA LIGASE Genomic Order:  1267
Name:  ? AL2G24890 Secondary Identifier:  ? PAC:35945603

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AL2G24890 0.5kb upstream 0.5kb upstream 7945   true scaffold_2: 11768031-11775975 Arabidopsis lyrata
AL2G24890 0.5kb upstream 0.5kb upstream 500   false scaffold_2: 11768031-11768530 Arabidopsis lyrata
AL2G24890 0.5kb downstream 0.5kb downstream 7945   true scaffold_2: 11768531-11776475 Arabidopsis lyrata
AL2G24890 0.5kb downstream 0.5kb downstream 500   false scaffold_2: 11775976-11776475 Arabidopsis lyrata
AL2G24890 1.0kb upstream 1.0kb upstream 8445   true scaffold_2: 11767531-11775975 Arabidopsis lyrata
AL2G24890 1.0kb upstream 1.0kb upstream 1000   false scaffold_2: 11767531-11768530 Arabidopsis lyrata
AL2G24890 1.0kb downstream 1.0kb downstream 8445   true scaffold_2: 11768531-11776975 Arabidopsis lyrata
AL2G24890 1.0kb downstream 1.0kb downstream 1000   false scaffold_2: 11775976-11776975 Arabidopsis lyrata
AL2G24890 2.0kb upstream 2.0kb upstream 9445   true scaffold_2: 11766531-11775975 Arabidopsis lyrata
AL2G24890 2.0kb upstream 2.0kb upstream 2000   false scaffold_2: 11766531-11768530 Arabidopsis lyrata
AL2G24890 2.0kb downstream 2.0kb downstream 9445   true scaffold_2: 11768531-11777975 Arabidopsis lyrata
AL2G24890 2.0kb downstream 2.0kb downstream 2000   false scaffold_2: 11775976-11777975 Arabidopsis lyrata
AL2G24890 5.0kb upstream 5.0kb upstream 12445   true scaffold_2: 11763531-11775975 Arabidopsis lyrata
AL2G24890 5.0kb upstream 5.0kb upstream 5000   false scaffold_2: 11763531-11768530 Arabidopsis lyrata
AL2G24890 5.0kb downstream 5.0kb downstream 12445   true scaffold_2: 11768531-11780975 Arabidopsis lyrata
AL2G24890 5.0kb downstream 5.0kb downstream 5000   false scaffold_2: 11775976-11780975 Arabidopsis lyrata
AL2G24890 10.0kb upstream 10.0kb upstream 17445   true scaffold_2: 11758531-11775975 Arabidopsis lyrata
AL2G24890 10.0kb upstream 10.0kb upstream 10000   false scaffold_2: 11758531-11768530 Arabidopsis lyrata
AL2G24890 10.0kb downstream 10.0kb downstream 17445   true scaffold_2: 11768531-11785975 Arabidopsis lyrata
AL2G24890 10.0kb downstream 10.0kb downstream 10000   false scaffold_2: 11775976-11785975 Arabidopsis lyrata

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122369536 5261 Brassicaceae View MSA
123833871 5264 Brassicales-Malvales View MSA
124339147 5266 SBM View MSA
124243523 5268 Malvidae View MSA
124063410 5270 Rosid View MSA
123738713 5271 Pentapetalae View MSA
122788649 5272 Eudicot View MSA
122046861 5273 Angiosperm View MSA
121351448 5274 Embryophyte View MSA
123426430 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain