Gene : AL2G27540 A. lyrata v2.1

Defline:  (1 of 1) PTHR23024:SF194 - CARBOXYLESTERASE 6-RELATED Genomic Order:  1514
Name:  ? AL2G27540 Secondary Identifier:  ? PAC:35946070

Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Alyrata PWY-6303 Arabidopsis lyrata pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AL2G27540 0.5kb upstream 0.5kb upstream 1682   true scaffold_2: 13255526-13257207 Arabidopsis lyrata
AL2G27540 0.5kb upstream 0.5kb upstream 500   false scaffold_2: 13255526-13256025 Arabidopsis lyrata
AL2G27540 0.5kb downstream 0.5kb downstream 1682   true scaffold_2: 13256026-13257707 Arabidopsis lyrata
AL2G27540 0.5kb downstream 0.5kb downstream 500   false scaffold_2: 13257208-13257707 Arabidopsis lyrata
AL2G27540 1.0kb upstream 1.0kb upstream 2182   true scaffold_2: 13255026-13257207 Arabidopsis lyrata
AL2G27540 1.0kb upstream 1.0kb upstream 1000   false scaffold_2: 13255026-13256025 Arabidopsis lyrata
AL2G27540 1.0kb downstream 1.0kb downstream 2182   true scaffold_2: 13256026-13258207 Arabidopsis lyrata
AL2G27540 1.0kb downstream 1.0kb downstream 1000   false scaffold_2: 13257208-13258207 Arabidopsis lyrata
AL2G27540 2.0kb upstream 2.0kb upstream 3182   true scaffold_2: 13254026-13257207 Arabidopsis lyrata
AL2G27540 2.0kb upstream 2.0kb upstream 2000   false scaffold_2: 13254026-13256025 Arabidopsis lyrata
AL2G27540 2.0kb downstream 2.0kb downstream 3182   true scaffold_2: 13256026-13259207 Arabidopsis lyrata
AL2G27540 2.0kb downstream 2.0kb downstream 2000   false scaffold_2: 13257208-13259207 Arabidopsis lyrata
AL2G27540 5.0kb upstream 5.0kb upstream 6182   true scaffold_2: 13251026-13257207 Arabidopsis lyrata
AL2G27540 5.0kb upstream 5.0kb upstream 5000   false scaffold_2: 13251026-13256025 Arabidopsis lyrata
AL2G27540 5.0kb downstream 5.0kb downstream 6182   true scaffold_2: 13256026-13262207 Arabidopsis lyrata
AL2G27540 5.0kb downstream 5.0kb downstream 5000   false scaffold_2: 13257208-13262207 Arabidopsis lyrata
AL2G27540 10.0kb upstream 10.0kb upstream 11182   true scaffold_2: 13246026-13257207 Arabidopsis lyrata
AL2G27540 10.0kb upstream 10.0kb upstream 10000   false scaffold_2: 13246026-13256025 Arabidopsis lyrata
AL2G27540 10.0kb downstream 10.0kb downstream 11182   true scaffold_2: 13256026-13267207 Arabidopsis lyrata
AL2G27540 10.0kb downstream 10.0kb downstream 10000   false scaffold_2: 13257208-13267207 Arabidopsis lyrata

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122377580 5261 Brassicaceae View MSA
123836923 5264 Brassicales-Malvales View MSA
124345017 5266 SBM View MSA
124253065 5268 Malvidae View MSA
124065608 5270 Rosid View MSA
123745232 5271 Pentapetalae View MSA
122791893 5272 Eudicot View MSA
122051062 5273 Angiosperm View MSA
123428915 5275 Viridiplantae View MSA
121350136 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain