Gene : AL2G26230 A. lyrata v2.1

Defline:  (1 of 1) PTHR11771:SF60 - LIPOXYGENASE 6, CHLOROPLASTIC Genomic Order:  1389
Name:  ? AL2G26230 Secondary Identifier:  ? PAC:35945729

Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Alyrata PWY-5409 Arabidopsis lyrata pathologic  
Alyrata PWY-5410 Arabidopsis lyrata pathologic  
Alyrata PWY-735 Arabidopsis lyrata pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AL2G26230 0.5kb upstream 0.5kb upstream 4815   true scaffold_2: 12601933-12606747 Arabidopsis lyrata
AL2G26230 0.5kb upstream 0.5kb upstream 500   false scaffold_2: 12601933-12602432 Arabidopsis lyrata
AL2G26230 0.5kb downstream 0.5kb downstream 4815   true scaffold_2: 12602433-12607247 Arabidopsis lyrata
AL2G26230 0.5kb downstream 0.5kb downstream 500   false scaffold_2: 12606748-12607247 Arabidopsis lyrata
AL2G26230 1.0kb upstream 1.0kb upstream 5315   true scaffold_2: 12601433-12606747 Arabidopsis lyrata
AL2G26230 1.0kb upstream 1.0kb upstream 1000   false scaffold_2: 12601433-12602432 Arabidopsis lyrata
AL2G26230 1.0kb downstream 1.0kb downstream 5315   true scaffold_2: 12602433-12607747 Arabidopsis lyrata
AL2G26230 1.0kb downstream 1.0kb downstream 1000   false scaffold_2: 12606748-12607747 Arabidopsis lyrata
AL2G26230 2.0kb upstream 2.0kb upstream 6315   true scaffold_2: 12600433-12606747 Arabidopsis lyrata
AL2G26230 2.0kb upstream 2.0kb upstream 2000   false scaffold_2: 12600433-12602432 Arabidopsis lyrata
AL2G26230 2.0kb downstream 2.0kb downstream 6315   true scaffold_2: 12602433-12608747 Arabidopsis lyrata
AL2G26230 2.0kb downstream 2.0kb downstream 2000   false scaffold_2: 12606748-12608747 Arabidopsis lyrata
AL2G26230 5.0kb upstream 5.0kb upstream 9315   true scaffold_2: 12597433-12606747 Arabidopsis lyrata
AL2G26230 5.0kb upstream 5.0kb upstream 5000   false scaffold_2: 12597433-12602432 Arabidopsis lyrata
AL2G26230 5.0kb downstream 5.0kb downstream 9315   true scaffold_2: 12602433-12611747 Arabidopsis lyrata
AL2G26230 5.0kb downstream 5.0kb downstream 5000   false scaffold_2: 12606748-12611747 Arabidopsis lyrata
AL2G26230 10.0kb upstream 10.0kb upstream 14315   true scaffold_2: 12592433-12606747 Arabidopsis lyrata
AL2G26230 10.0kb upstream 10.0kb upstream 10000   false scaffold_2: 12592433-12602432 Arabidopsis lyrata
AL2G26230 10.0kb downstream 10.0kb downstream 14315   true scaffold_2: 12602433-12616747 Arabidopsis lyrata
AL2G26230 10.0kb downstream 10.0kb downstream 10000   false scaffold_2: 12606748-12616747 Arabidopsis lyrata

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122365902 5261 Brassicaceae View MSA
123839661 5264 Brassicales-Malvales View MSA
124340250 5266 SBM View MSA
124236928 5268 Malvidae View MSA
124068489 5270 Rosid View MSA
123750087 5271 Pentapetalae View MSA
122788853 5272 Eudicot View MSA
122051623 5273 Angiosperm View MSA
123429188 5275 Viridiplantae View MSA
121351701 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain