Gene : AL2G30170 A. lyrata v2.1

Defline:  (1 of 3) K01835 - phosphoglucomutase (pgm) Genomic Order:  1753
Name:  ? AL2G30170 Secondary Identifier:  ? PAC:35944988

Sequence Feature Displayer

Ontology Annotation Displayer

8 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Alyrata GLUCOSE1PMETAB-PWY Arabidopsis lyrata pathologic  
Alyrata GLYCOGENSYNTH-PWY Arabidopsis lyrata pathologic  
Alyrata PWY-3801 Arabidopsis lyrata pathologic  
Alyrata PWY-622 Arabidopsis lyrata pathologic  
Alyrata PWY66-422 Arabidopsis lyrata pathologic  
Alyrata PWY-7238 Arabidopsis lyrata pathologic  
Alyrata PWY-7343 Arabidopsis lyrata pathologic  
Alyrata SUCSYN-PWY Arabidopsis lyrata pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AL2G30170 0.5kb upstream 0.5kb upstream 4905   true scaffold_2: 14578308-14583212 Arabidopsis lyrata
AL2G30170 0.5kb upstream 0.5kb upstream 500   false scaffold_2: 14582713-14583212 Arabidopsis lyrata
AL2G30170 0.5kb downstream 0.5kb downstream 4905   true scaffold_2: 14577808-14582712 Arabidopsis lyrata
AL2G30170 0.5kb downstream 0.5kb downstream 500   false scaffold_2: 14577808-14578307 Arabidopsis lyrata
AL2G30170 1.0kb upstream 1.0kb upstream 5405   true scaffold_2: 14578308-14583712 Arabidopsis lyrata
AL2G30170 1.0kb upstream 1.0kb upstream 1000   false scaffold_2: 14582713-14583712 Arabidopsis lyrata
AL2G30170 1.0kb downstream 1.0kb downstream 5405   true scaffold_2: 14577308-14582712 Arabidopsis lyrata
AL2G30170 1.0kb downstream 1.0kb downstream 1000   false scaffold_2: 14577308-14578307 Arabidopsis lyrata
AL2G30170 2.0kb upstream 2.0kb upstream 6405   true scaffold_2: 14578308-14584712 Arabidopsis lyrata
AL2G30170 2.0kb upstream 2.0kb upstream 2000   false scaffold_2: 14582713-14584712 Arabidopsis lyrata
AL2G30170 2.0kb downstream 2.0kb downstream 6405   true scaffold_2: 14576308-14582712 Arabidopsis lyrata
AL2G30170 2.0kb downstream 2.0kb downstream 2000   false scaffold_2: 14576308-14578307 Arabidopsis lyrata
AL2G30170 5.0kb upstream 5.0kb upstream 9405   true scaffold_2: 14578308-14587712 Arabidopsis lyrata
AL2G30170 5.0kb upstream 5.0kb upstream 5000   false scaffold_2: 14582713-14587712 Arabidopsis lyrata
AL2G30170 5.0kb downstream 5.0kb downstream 9405   true scaffold_2: 14573308-14582712 Arabidopsis lyrata
AL2G30170 5.0kb downstream 5.0kb downstream 5000   false scaffold_2: 14573308-14578307 Arabidopsis lyrata
AL2G30170 10.0kb upstream 10.0kb upstream 14405   true scaffold_2: 14578308-14592712 Arabidopsis lyrata
AL2G30170 10.0kb upstream 10.0kb upstream 10000   false scaffold_2: 14582713-14592712 Arabidopsis lyrata
AL2G30170 10.0kb downstream 10.0kb downstream 14405   true scaffold_2: 14568308-14582712 Arabidopsis lyrata
AL2G30170 10.0kb downstream 10.0kb downstream 10000   false scaffold_2: 14568308-14578307 Arabidopsis lyrata

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122376242 5261 Brassicaceae View MSA
123835209 5264 Brassicales-Malvales View MSA
124342115 5266 SBM View MSA
124253593 5268 Malvidae View MSA
124065382 5270 Rosid View MSA
123740036 5271 Pentapetalae View MSA
122791577 5272 Eudicot View MSA
122046067 5273 Angiosperm View MSA
121346784 5274 Embryophyte View MSA
123426013 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain