Gene : AL2G28280 A. lyrata v2.1

Defline:  (1 of 2) 2.5.1.15 - Dihydropteroate synthase / Dihydropteroate pyrophosphorylase Genomic Order:  1579
Name:  ? AL2G28280 Secondary Identifier:  ? PAC:35946344

Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Alyrata PWY-6147 Arabidopsis lyrata pathologic  
Alyrata PWY-6612 Arabidopsis lyrata pathologic  
Alyrata PWY-6614 Arabidopsis lyrata pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AL2G28280 0.5kb upstream 0.5kb upstream 2072   true scaffold_2: 13634251-13636322 Arabidopsis lyrata
AL2G28280 0.5kb upstream 0.5kb upstream 500   false scaffold_2: 13635823-13636322 Arabidopsis lyrata
AL2G28280 0.5kb downstream 0.5kb downstream 2072   true scaffold_2: 13633751-13635822 Arabidopsis lyrata
AL2G28280 0.5kb downstream 0.5kb downstream 500   false scaffold_2: 13633751-13634250 Arabidopsis lyrata
AL2G28280 1.0kb upstream 1.0kb upstream 2572   true scaffold_2: 13634251-13636822 Arabidopsis lyrata
AL2G28280 1.0kb upstream 1.0kb upstream 1000   false scaffold_2: 13635823-13636822 Arabidopsis lyrata
AL2G28280 1.0kb downstream 1.0kb downstream 2572   true scaffold_2: 13633251-13635822 Arabidopsis lyrata
AL2G28280 1.0kb downstream 1.0kb downstream 1000   false scaffold_2: 13633251-13634250 Arabidopsis lyrata
AL2G28280 2.0kb upstream 2.0kb upstream 3572   true scaffold_2: 13634251-13637822 Arabidopsis lyrata
AL2G28280 2.0kb upstream 2.0kb upstream 2000   false scaffold_2: 13635823-13637822 Arabidopsis lyrata
AL2G28280 2.0kb downstream 2.0kb downstream 3572   true scaffold_2: 13632251-13635822 Arabidopsis lyrata
AL2G28280 2.0kb downstream 2.0kb downstream 2000   false scaffold_2: 13632251-13634250 Arabidopsis lyrata
AL2G28280 5.0kb upstream 5.0kb upstream 6572   true scaffold_2: 13634251-13640822 Arabidopsis lyrata
AL2G28280 5.0kb upstream 5.0kb upstream 5000   false scaffold_2: 13635823-13640822 Arabidopsis lyrata
AL2G28280 5.0kb downstream 5.0kb downstream 6572   true scaffold_2: 13629251-13635822 Arabidopsis lyrata
AL2G28280 5.0kb downstream 5.0kb downstream 5000   false scaffold_2: 13629251-13634250 Arabidopsis lyrata
AL2G28280 10.0kb upstream 10.0kb upstream 11572   true scaffold_2: 13634251-13645822 Arabidopsis lyrata
AL2G28280 10.0kb upstream 10.0kb upstream 10000   false scaffold_2: 13635823-13645822 Arabidopsis lyrata
AL2G28280 10.0kb downstream 10.0kb downstream 11572   true scaffold_2: 13624251-13635822 Arabidopsis lyrata
AL2G28280 10.0kb downstream 10.0kb downstream 10000   false scaffold_2: 13624251-13634250 Arabidopsis lyrata

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122379382 5261 Brassicaceae View MSA
123802238 5264 Brassicales-Malvales View MSA
124299450 5266 SBM View MSA
124150860 5268 Malvidae View MSA
123876402 5270 Rosid View MSA
123746213 5271 Pentapetalae View MSA
122790018 5272 Eudicot View MSA
122044899 5273 Angiosperm View MSA
121345768 5274 Embryophyte View MSA
123427891 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain