Gene : AL2G31280 A. lyrata v2.1

Defline:  (1 of 3) PTHR11200:SF128 - TYPE I INOSITOL 1,4,5-TRISPHOSPHATE 5-PHOSPHATASE 1 Genomic Order:  1858
Name:  ? AL2G31280 Secondary Identifier:  ? PAC:35944730

Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Alyrata PWY-6358 Arabidopsis lyrata pathologic  
Alyrata PWY-6363 Arabidopsis lyrata pathologic  
Alyrata PWY-6364 Arabidopsis lyrata pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AL2G31280 0.5kb upstream 0.5kb upstream 3933   true scaffold_2: 15000524-15004456 Arabidopsis lyrata
AL2G31280 0.5kb upstream 0.5kb upstream 500   false scaffold_2: 15003957-15004456 Arabidopsis lyrata
AL2G31280 0.5kb downstream 0.5kb downstream 3933   true scaffold_2: 15000024-15003956 Arabidopsis lyrata
AL2G31280 0.5kb downstream 0.5kb downstream 500   false scaffold_2: 15000024-15000523 Arabidopsis lyrata
AL2G31280 1.0kb upstream 1.0kb upstream 4433   true scaffold_2: 15000524-15004956 Arabidopsis lyrata
AL2G31280 1.0kb upstream 1.0kb upstream 1000   false scaffold_2: 15003957-15004956 Arabidopsis lyrata
AL2G31280 1.0kb downstream 1.0kb downstream 4433   true scaffold_2: 14999524-15003956 Arabidopsis lyrata
AL2G31280 1.0kb downstream 1.0kb downstream 1000   false scaffold_2: 14999524-15000523 Arabidopsis lyrata
AL2G31280 2.0kb upstream 2.0kb upstream 5433   true scaffold_2: 15000524-15005956 Arabidopsis lyrata
AL2G31280 2.0kb upstream 2.0kb upstream 2000   false scaffold_2: 15003957-15005956 Arabidopsis lyrata
AL2G31280 2.0kb downstream 2.0kb downstream 5433   true scaffold_2: 14998524-15003956 Arabidopsis lyrata
AL2G31280 2.0kb downstream 2.0kb downstream 2000   false scaffold_2: 14998524-15000523 Arabidopsis lyrata
AL2G31280 5.0kb upstream 5.0kb upstream 8433   true scaffold_2: 15000524-15008956 Arabidopsis lyrata
AL2G31280 5.0kb upstream 5.0kb upstream 5000   false scaffold_2: 15003957-15008956 Arabidopsis lyrata
AL2G31280 5.0kb downstream 5.0kb downstream 8433   true scaffold_2: 14995524-15003956 Arabidopsis lyrata
AL2G31280 5.0kb downstream 5.0kb downstream 5000   false scaffold_2: 14995524-15000523 Arabidopsis lyrata
AL2G31280 10.0kb upstream 10.0kb upstream 13433   true scaffold_2: 15000524-15013956 Arabidopsis lyrata
AL2G31280 10.0kb upstream 10.0kb upstream 10000   false scaffold_2: 15003957-15013956 Arabidopsis lyrata
AL2G31280 10.0kb downstream 10.0kb downstream 13433   true scaffold_2: 14990524-15003956 Arabidopsis lyrata
AL2G31280 10.0kb downstream 10.0kb downstream 10000   false scaffold_2: 14990524-15000523 Arabidopsis lyrata

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122364436 5261 Brassicaceae View MSA
123839810 5264 Brassicales-Malvales View MSA
124339394 5266 SBM View MSA
124241049 5268 Malvidae View MSA
124064481 5270 Rosid View MSA
123740737 5271 Pentapetalae View MSA
122795494 5272 Eudicot View MSA
122042148 5273 Angiosperm View MSA
121350777 5274 Embryophyte View MSA
123427535 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain