Gene : AL2G34180 A. lyrata v2.1

Defline:  (1 of 1) PTHR22603:SF41 - CHOLINE KINASE 2-RELATED Genomic Order:  2135
Name:  ? AL2G34180 Secondary Identifier:  ? PAC:35945693

Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Alyrata PWY-3385 Arabidopsis lyrata pathologic  
Alyrata PWY4FS-6 Arabidopsis lyrata pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AL2G34180 0.5kb upstream 0.5kb upstream 2925   true scaffold_2: 16234206-16237130 Arabidopsis lyrata
AL2G34180 0.5kb upstream 0.5kb upstream 500   false scaffold_2: 16234206-16234705 Arabidopsis lyrata
AL2G34180 0.5kb downstream 0.5kb downstream 2925   true scaffold_2: 16234706-16237630 Arabidopsis lyrata
AL2G34180 0.5kb downstream 0.5kb downstream 500   false scaffold_2: 16237131-16237630 Arabidopsis lyrata
AL2G34180 1.0kb upstream 1.0kb upstream 3425   true scaffold_2: 16233706-16237130 Arabidopsis lyrata
AL2G34180 1.0kb upstream 1.0kb upstream 1000   false scaffold_2: 16233706-16234705 Arabidopsis lyrata
AL2G34180 1.0kb downstream 1.0kb downstream 3425   true scaffold_2: 16234706-16238130 Arabidopsis lyrata
AL2G34180 1.0kb downstream 1.0kb downstream 1000   false scaffold_2: 16237131-16238130 Arabidopsis lyrata
AL2G34180 2.0kb upstream 2.0kb upstream 4425   true scaffold_2: 16232706-16237130 Arabidopsis lyrata
AL2G34180 2.0kb upstream 2.0kb upstream 2000   false scaffold_2: 16232706-16234705 Arabidopsis lyrata
AL2G34180 2.0kb downstream 2.0kb downstream 4425   true scaffold_2: 16234706-16239130 Arabidopsis lyrata
AL2G34180 2.0kb downstream 2.0kb downstream 2000   false scaffold_2: 16237131-16239130 Arabidopsis lyrata
AL2G34180 5.0kb upstream 5.0kb upstream 7425   true scaffold_2: 16229706-16237130 Arabidopsis lyrata
AL2G34180 5.0kb upstream 5.0kb upstream 5000   false scaffold_2: 16229706-16234705 Arabidopsis lyrata
AL2G34180 5.0kb downstream 5.0kb downstream 7425   true scaffold_2: 16234706-16242130 Arabidopsis lyrata
AL2G34180 5.0kb downstream 5.0kb downstream 5000   false scaffold_2: 16237131-16242130 Arabidopsis lyrata
AL2G34180 10.0kb upstream 10.0kb upstream 12425   true scaffold_2: 16224706-16237130 Arabidopsis lyrata
AL2G34180 10.0kb upstream 10.0kb upstream 10000   false scaffold_2: 16224706-16234705 Arabidopsis lyrata
AL2G34180 10.0kb downstream 10.0kb downstream 12425   true scaffold_2: 16234706-16247130 Arabidopsis lyrata
AL2G34180 10.0kb downstream 10.0kb downstream 10000   false scaffold_2: 16237131-16247130 Arabidopsis lyrata

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122373896 5261 Brassicaceae View MSA
123830866 5264 Brassicales-Malvales View MSA
124346062 5266 SBM View MSA
124248672 5268 Malvidae View MSA
124069180 5270 Rosid View MSA
123746925 5271 Pentapetalae View MSA
122797485 5272 Eudicot View MSA
122047896 5273 Angiosperm View MSA
121347088 5274 Embryophyte View MSA
123426626 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain