Gene : AL2G40080 A. lyrata v2.1

Defline:  (1 of 2) 1.1.1.205 - IMP dehydrogenase / Inosinic acid dehydrogenase Genomic Order:  2688
Name:  ? AL2G40080 Secondary Identifier:  ? PAC:35947485

Sequence Feature Displayer

Ontology Annotation Displayer

5 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Alyrata PWY-5695 Arabidopsis lyrata pathologic  
Alyrata PWY-6596 Arabidopsis lyrata pathologic  
Alyrata PWY-7221 Arabidopsis lyrata pathologic  
Alyrata PWY-7228 Arabidopsis lyrata pathologic  
Alyrata PWY-841 Arabidopsis lyrata pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AL2G40080 0.5kb upstream 0.5kb upstream 3835   true scaffold_2: 18681829-18685663 Arabidopsis lyrata
AL2G40080 0.5kb upstream 0.5kb upstream 500   false scaffold_2: 18685164-18685663 Arabidopsis lyrata
AL2G40080 0.5kb downstream 0.5kb downstream 3835   true scaffold_2: 18681329-18685163 Arabidopsis lyrata
AL2G40080 0.5kb downstream 0.5kb downstream 500   false scaffold_2: 18681329-18681828 Arabidopsis lyrata
AL2G40080 1.0kb upstream 1.0kb upstream 4335   true scaffold_2: 18681829-18686163 Arabidopsis lyrata
AL2G40080 1.0kb upstream 1.0kb upstream 1000   false scaffold_2: 18685164-18686163 Arabidopsis lyrata
AL2G40080 1.0kb downstream 1.0kb downstream 4335   true scaffold_2: 18680829-18685163 Arabidopsis lyrata
AL2G40080 1.0kb downstream 1.0kb downstream 1000   false scaffold_2: 18680829-18681828 Arabidopsis lyrata
AL2G40080 2.0kb upstream 2.0kb upstream 5335   true scaffold_2: 18681829-18687163 Arabidopsis lyrata
AL2G40080 2.0kb upstream 2.0kb upstream 2000   false scaffold_2: 18685164-18687163 Arabidopsis lyrata
AL2G40080 2.0kb downstream 2.0kb downstream 5335   true scaffold_2: 18679829-18685163 Arabidopsis lyrata
AL2G40080 2.0kb downstream 2.0kb downstream 2000   false scaffold_2: 18679829-18681828 Arabidopsis lyrata
AL2G40080 5.0kb upstream 5.0kb upstream 8335   true scaffold_2: 18681829-18690163 Arabidopsis lyrata
AL2G40080 5.0kb upstream 5.0kb upstream 5000   false scaffold_2: 18685164-18690163 Arabidopsis lyrata
AL2G40080 5.0kb downstream 5.0kb downstream 8335   true scaffold_2: 18676829-18685163 Arabidopsis lyrata
AL2G40080 5.0kb downstream 5.0kb downstream 5000   false scaffold_2: 18676829-18681828 Arabidopsis lyrata
AL2G40080 10.0kb upstream 10.0kb upstream 13335   true scaffold_2: 18681829-18695163 Arabidopsis lyrata
AL2G40080 10.0kb upstream 10.0kb upstream 10000   false scaffold_2: 18685164-18695163 Arabidopsis lyrata
AL2G40080 10.0kb downstream 10.0kb downstream 13335   true scaffold_2: 18671829-18685163 Arabidopsis lyrata
AL2G40080 10.0kb downstream 10.0kb downstream 10000   false scaffold_2: 18671829-18681828 Arabidopsis lyrata

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122367970 5261 Brassicaceae View MSA
123799457 5264 Brassicales-Malvales View MSA
124296976 5266 SBM View MSA
124244114 5268 Malvidae View MSA
124063330 5270 Rosid View MSA
123738043 5271 Pentapetalae View MSA
122797755 5272 Eudicot View MSA
122042253 5273 Angiosperm View MSA
121346920 5274 Embryophyte View MSA
123424189 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain