Gene : AL2G40200 A. lyrata v2.1
Defline:  (1 of 1) PTHR23076:SF44 - ATP-DEPENDENT ZINC METALLOPROTEASE FTSH 12, CHLOROPLASTIC Genomic Order:  2699
Name:  ? AL2G40200 Secondary Identifier:  ? PAC:35946476
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0 Pathways

Genomics

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Expression

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3 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AL2G40200 0.5kb upstream 0.5kb upstream 6576   true scaffold_2: 18721018-18727593 Arabidopsis lyrata
AL2G40200 0.5kb upstream 0.5kb upstream 500   false scaffold_2: 18721018-18721517 Arabidopsis lyrata
AL2G40200 0.5kb downstream 0.5kb downstream 6576   true scaffold_2: 18721518-18728093 Arabidopsis lyrata
AL2G40200 0.5kb downstream 0.5kb downstream 500   false scaffold_2: 18727594-18728093 Arabidopsis lyrata
AL2G40200 1.0kb upstream 1.0kb upstream 7076   true scaffold_2: 18720518-18727593 Arabidopsis lyrata
AL2G40200 1.0kb upstream 1.0kb upstream 1000   false scaffold_2: 18720518-18721517 Arabidopsis lyrata
AL2G40200 1.0kb downstream 1.0kb downstream 7076   true scaffold_2: 18721518-18728593 Arabidopsis lyrata
AL2G40200 1.0kb downstream 1.0kb downstream 1000   false scaffold_2: 18727594-18728593 Arabidopsis lyrata
AL2G40200 2.0kb upstream 2.0kb upstream 8076   true scaffold_2: 18719518-18727593 Arabidopsis lyrata
AL2G40200 2.0kb upstream 2.0kb upstream 2000   false scaffold_2: 18719518-18721517 Arabidopsis lyrata
AL2G40200 2.0kb downstream 2.0kb downstream 8076   true scaffold_2: 18721518-18729593 Arabidopsis lyrata
AL2G40200 2.0kb downstream 2.0kb downstream 2000   false scaffold_2: 18727594-18729593 Arabidopsis lyrata
AL2G40200 5.0kb upstream 5.0kb upstream 11076   true scaffold_2: 18716518-18727593 Arabidopsis lyrata
AL2G40200 5.0kb upstream 5.0kb upstream 5000   false scaffold_2: 18716518-18721517 Arabidopsis lyrata
AL2G40200 5.0kb downstream 5.0kb downstream 11076   true scaffold_2: 18721518-18732593 Arabidopsis lyrata
AL2G40200 5.0kb downstream 5.0kb downstream 5000   false scaffold_2: 18727594-18732593 Arabidopsis lyrata
AL2G40200 10.0kb upstream 10.0kb upstream 16076   true scaffold_2: 18711518-18727593 Arabidopsis lyrata
AL2G40200 10.0kb upstream 10.0kb upstream 10000   false scaffold_2: 18711518-18721517 Arabidopsis lyrata
AL2G40200 10.0kb downstream 10.0kb downstream 16076   true scaffold_2: 18721518-18737593 Arabidopsis lyrata
AL2G40200 10.0kb downstream 10.0kb downstream 10000   false scaffold_2: 18727594-18737593 Arabidopsis lyrata

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122371021 5261 Brassicaceae View MSA
123832748 5264 Brassicales-Malvales View MSA
124338369 5266 SBM View MSA
124238329 5268 Malvidae View MSA
124065156 5270 Rosid View MSA
123736901 5271 Pentapetalae View MSA
122790141 5272 Eudicot View MSA
122047012 5273 Angiosperm View MSA
121345468 5274 Embryophyte View MSA
123380221 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain