Gene : AL2G41810 A. lyrata v2.1

Defline:  (1 of 1) PTHR23406//PTHR23406:SF11 - MALIC ENZYME-RELATED // SUBFAMILY NOT NAMED Genomic Order:  2852
Name:  ? AL2G41810 Secondary Identifier:  ? PAC:35946838

Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Alyrata GLUCONEO-PWY Arabidopsis lyrata pathologic  
Alyrata PWY-241 Arabidopsis lyrata pathologic  
Alyrata PWY-7117 Arabidopsis lyrata pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AL2G41810 0.5kb upstream 0.5kb upstream 4445   true scaffold_2: 19297964-19302408 Arabidopsis lyrata
AL2G41810 0.5kb upstream 0.5kb upstream 500   false scaffold_2: 19297964-19298463 Arabidopsis lyrata
AL2G41810 0.5kb downstream 0.5kb downstream 4445   true scaffold_2: 19298464-19302908 Arabidopsis lyrata
AL2G41810 0.5kb downstream 0.5kb downstream 500   false scaffold_2: 19302409-19302908 Arabidopsis lyrata
AL2G41810 1.0kb upstream 1.0kb upstream 4945   true scaffold_2: 19297464-19302408 Arabidopsis lyrata
AL2G41810 1.0kb upstream 1.0kb upstream 1000   false scaffold_2: 19297464-19298463 Arabidopsis lyrata
AL2G41810 1.0kb downstream 1.0kb downstream 4945   true scaffold_2: 19298464-19303408 Arabidopsis lyrata
AL2G41810 1.0kb downstream 1.0kb downstream 1000   false scaffold_2: 19302409-19303408 Arabidopsis lyrata
AL2G41810 2.0kb upstream 2.0kb upstream 5945   true scaffold_2: 19296464-19302408 Arabidopsis lyrata
AL2G41810 2.0kb upstream 2.0kb upstream 2000   false scaffold_2: 19296464-19298463 Arabidopsis lyrata
AL2G41810 2.0kb downstream 2.0kb downstream 5945   true scaffold_2: 19298464-19304408 Arabidopsis lyrata
AL2G41810 2.0kb downstream 2.0kb downstream 2000   false scaffold_2: 19302409-19304408 Arabidopsis lyrata
AL2G41810 5.0kb upstream 5.0kb upstream 8945   true scaffold_2: 19293464-19302408 Arabidopsis lyrata
AL2G41810 5.0kb upstream 5.0kb upstream 5000   false scaffold_2: 19293464-19298463 Arabidopsis lyrata
AL2G41810 5.0kb downstream 5.0kb downstream 8945   true scaffold_2: 19298464-19307408 Arabidopsis lyrata
AL2G41810 5.0kb downstream 5.0kb downstream 5000   false scaffold_2: 19302409-19307408 Arabidopsis lyrata
AL2G41810 10.0kb upstream 10.0kb upstream 13945   true scaffold_2: 19288464-19302408 Arabidopsis lyrata
AL2G41810 10.0kb upstream 10.0kb upstream 10000   false scaffold_2: 19288464-19298463 Arabidopsis lyrata
AL2G41810 10.0kb downstream 10.0kb downstream 13945   true scaffold_2: 19298464-19312408 Arabidopsis lyrata
AL2G41810 10.0kb downstream 10.0kb downstream 10000   false scaffold_2: 19302409-19312408 Arabidopsis lyrata

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122371392 5261 Brassicaceae View MSA
123831539 5264 Brassicales-Malvales View MSA
124336457 5266 SBM View MSA
124242817 5268 Malvidae View MSA
124068705 5270 Rosid View MSA
123751350 5271 Pentapetalae View MSA
122794130 5272 Eudicot View MSA
122042224 5273 Angiosperm View MSA
121345569 5274 Embryophyte View MSA
123428715 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain