Gene : AL3G11900 A. lyrata v2.1
Defline:  (1 of 2) PTHR10621//PTHR10621:SF12 - UV EXCISION REPAIR PROTEIN RAD23 // SUBFAMILY NOT NAMED Genomic Order:  182
Name:  ? AL3G11900 Secondary Identifier:  ? PAC:35942938
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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AL3G11900 0.5kb upstream 0.5kb upstream 3829   true scaffold_3: 654042-657870 Arabidopsis lyrata
AL3G11900 0.5kb upstream 0.5kb upstream 500   false scaffold_3: 657371-657870 Arabidopsis lyrata
AL3G11900 0.5kb downstream 0.5kb downstream 3829   true scaffold_3: 653542-657370 Arabidopsis lyrata
AL3G11900 0.5kb downstream 0.5kb downstream 500   false scaffold_3: 653542-654041 Arabidopsis lyrata
AL3G11900 1.0kb upstream 1.0kb upstream 4329   true scaffold_3: 654042-658370 Arabidopsis lyrata
AL3G11900 1.0kb upstream 1.0kb upstream 1000   false scaffold_3: 657371-658370 Arabidopsis lyrata
AL3G11900 1.0kb downstream 1.0kb downstream 4329   true scaffold_3: 653042-657370 Arabidopsis lyrata
AL3G11900 1.0kb downstream 1.0kb downstream 1000   false scaffold_3: 653042-654041 Arabidopsis lyrata
AL3G11900 2.0kb upstream 2.0kb upstream 5329   true scaffold_3: 654042-659370 Arabidopsis lyrata
AL3G11900 2.0kb upstream 2.0kb upstream 2000   false scaffold_3: 657371-659370 Arabidopsis lyrata
AL3G11900 2.0kb downstream 2.0kb downstream 5329   true scaffold_3: 652042-657370 Arabidopsis lyrata
AL3G11900 2.0kb downstream 2.0kb downstream 2000   false scaffold_3: 652042-654041 Arabidopsis lyrata
AL3G11900 5.0kb upstream 5.0kb upstream 8329   true scaffold_3: 654042-662370 Arabidopsis lyrata
AL3G11900 5.0kb upstream 5.0kb upstream 5000   false scaffold_3: 657371-662370 Arabidopsis lyrata
AL3G11900 5.0kb downstream 5.0kb downstream 8329   true scaffold_3: 649042-657370 Arabidopsis lyrata
AL3G11900 5.0kb downstream 5.0kb downstream 5000   false scaffold_3: 649042-654041 Arabidopsis lyrata
AL3G11900 10.0kb upstream 10.0kb upstream 13329   true scaffold_3: 654042-667370 Arabidopsis lyrata
AL3G11900 10.0kb upstream 10.0kb upstream 10000   false scaffold_3: 657371-667370 Arabidopsis lyrata
AL3G11900 10.0kb downstream 10.0kb downstream 13329   true scaffold_3: 644042-657370 Arabidopsis lyrata
AL3G11900 10.0kb downstream 10.0kb downstream 10000   false scaffold_3: 644042-654041 Arabidopsis lyrata

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122040911 5273 Angiosperm View MSA
122375164 5261 Brassicaceae View MSA
123837452 5264 Brassicales-Malvales View MSA
124347950 5266 SBM View MSA
124244016 5268 Malvidae View MSA
124061978 5270 Rosid View MSA
123736504 5271 Pentapetalae View MSA
122787573 5272 Eudicot View MSA
121350140 5274 Embryophyte View MSA
123423951 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain